Strain Fitness in Burkholderia phytofirmans PsJN around BPHYT_RS34435

Experiment: Phenylacetic 5 mM (C)

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Phenylacetic 5 mM (C)
3,332,898	-				-0.4
3,333,072	-				-0.6
3,333,097	-				+0.6
3,333,178	-		BPHYT_RS34430	0.11	+0.5
3,333,841	+				-0.7
3,333,842	-				+0.3
3,334,027	+		BPHYT_RS34435	0.11	+0.5
3,334,207	+		BPHYT_RS34435	0.25	+1.6
3,334,208	-		BPHYT_RS34435	0.25	+1.2
3,334,344	-		BPHYT_RS34435	0.36	+0.3
3,334,412	-		BPHYT_RS34435	0.41	+0.7
3,334,469	-		BPHYT_RS34435	0.45	+0.2
3,334,477	+		BPHYT_RS34435	0.46	+1.1
3,334,613	+		BPHYT_RS34435	0.57	-0.6
3,334,614	-		BPHYT_RS34435	0.57	-0.9
3,334,658	+		BPHYT_RS34435	0.60	-0.9
3,334,661	-		BPHYT_RS34435	0.60	+0.8
3,334,661	-		BPHYT_RS34435	0.60	+0.1
3,334,661	-		BPHYT_RS34435	0.60	-1.1
3,334,990	+		BPHYT_RS34435	0.86	+2.3
3,334,991	-		BPHYT_RS34435	0.86	-0.0
3,335,095	+				-0.6
3,335,107	+				-2.5
3,335,107	+				+0.0
3,335,107	+				-0.1
3,335,127	+				+0.4
3,335,224	+				-1.3
3,335,403	-				-0.3
3,335,478	+		BPHYT_RS34440	0.11	-0.2
3,335,671	-		BPHYT_RS34440	0.26	-0.5
3,335,812	+		BPHYT_RS34440	0.38	+0.1
3,335,813	-		BPHYT_RS34440	0.38	+0.4