Strain Fitness in Burkholderia phytofirmans PsJN around BPHYT_RS34275

Experiment: Phenylacetic 5 mM (C)

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Phenylacetic 5 mM (C)
3,291,638	+				+0.6
3,291,638	+				-0.7
3,291,642	-				-1.5
3,291,642	-				+0.1
3,291,642	-				-0.6
3,291,653	+				+0.1
3,292,034	+		BPHYT_RS34270	0.43	+0.3
3,292,135	+		BPHYT_RS34270	0.55	-0.2
3,292,637	+				+0.1
3,292,637	+				-0.3
3,292,637	+				+4.5
3,292,746	-				-1.5
3,292,884	-		BPHYT_RS34275	0.15	+2.3
3,293,702	+		BPHYT_RS34275	0.67	+0.3
3,293,703	-		BPHYT_RS34275	0.67	-0.2
3,293,703	-		BPHYT_RS34275	0.67	-0.1
3,293,721	+		BPHYT_RS34275	0.68	+1.0
3,293,956	-		BPHYT_RS34275	0.82	-0.3
3,294,447	+				+0.6
3,294,609	+				+1.7
3,294,739	+		BPHYT_RS34280	0.45	+0.6
3,294,761	+		BPHYT_RS34280	0.51	-1.7
3,294,766	-		BPHYT_RS34280	0.52	+1.6
3,295,043	+				-0.7
3,295,091	-				-0.3
3,295,131	+				+2.5
3,295,206	+				+0.9
3,295,224	+				+0.8