Strain Fitness in Burkholderia phytofirmans PsJN around BPHYT_RS33780

Experiment: Phenylacetic 5 mM (C)

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Phenylacetic 5 mM (C)
3,164,830	+		BPHYT_RS33775	0.71	-0.1
3,164,831	-		BPHYT_RS33775	0.71	-0.0
3,164,831	-		BPHYT_RS33775	0.71	+0.2
3,164,843	+		BPHYT_RS33775	0.72	+0.4
3,164,843	+		BPHYT_RS33775	0.72	+0.1
3,164,984	-		BPHYT_RS33775	0.76	+2.4
3,165,813	-				-1.6
3,165,855	-				-1.6
3,165,997	+				-0.9
3,165,998	-				+0.1
3,166,110	+		BPHYT_RS33780	0.13	-0.4
3,166,111	-		BPHYT_RS33780	0.13	+3.8
3,166,575	+		BPHYT_RS33780	0.34	-0.3
3,166,576	-		BPHYT_RS33780	0.35	-0.3
3,166,965	+		BPHYT_RS33780	0.52	+2.5
3,166,965	+		BPHYT_RS33780	0.52	+0.8
3,166,966	-		BPHYT_RS33780	0.52	+0.8
3,167,121	+		BPHYT_RS33780	0.59	+2.5
3,167,322	+		BPHYT_RS33780	0.68	-0.2
3,167,322	+		BPHYT_RS33780	0.68	-0.7
3,167,323	-		BPHYT_RS33780	0.68	+0.5
3,167,352	+		BPHYT_RS33780	0.70	+0.5
3,167,353	-		BPHYT_RS33780	0.70	+1.5
3,167,353	-		BPHYT_RS33780	0.70	-0.0
3,167,385	+		BPHYT_RS33780	0.71	-1.1
3,167,386	-		BPHYT_RS33780	0.71	-1.0
3,167,386	-		BPHYT_RS33780	0.71	-0.1
3,167,392	-				+3.7
3,167,755	+		BPHYT_RS33780	0.88	-2.4
3,167,755	+		BPHYT_RS33780	0.88	-0.7
3,167,810	+				-2.2
3,167,811	-				-3.5
3,167,811	-				+0.1
3,167,898	+				+0.2
3,168,022	-				-0.6
3,168,960	-		BPHYT_RS33785	0.37	-0.4