Strain Fitness in Burkholderia phytofirmans PsJN around BPHYT_RS33215

Experiment: Phenylacetic 5 mM (C)

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Phenylacetic 5 mM (C)
3,029,856	+				-0.0
3,029,891	-				+1.1
3,029,911	-				+0.6
3,030,045	+		BPHYT_RS33215	0.18	-0.6
3,030,217	+		BPHYT_RS33215	0.42	+1.0
3,030,221	+		BPHYT_RS33215	0.42	-1.2
3,030,225	+		BPHYT_RS33215	0.43	-0.6
3,030,383	-		BPHYT_RS33215	0.65	+1.6
3,030,455	-		BPHYT_RS33215	0.75	-0.6
3,030,502	+		BPHYT_RS33215	0.81	+0.6
3,030,673	+				-1.4
3,030,673	+				-1.9
3,030,673	+				-1.2
3,030,730	+				-2.6
3,030,730	+				-0.3
3,030,829	-				-1.1
3,030,890	-		BPHYT_RS33220	0.12	+0.4
3,030,895	+		BPHYT_RS33220	0.12	+0.7
3,030,896	-		BPHYT_RS33220	0.13	-1.5
3,030,941	-		BPHYT_RS33220	0.15	-0.2
3,030,941	-		BPHYT_RS33220	0.15	-0.1
3,031,398	-		BPHYT_RS33220	0.38	-1.1
3,031,403	+		BPHYT_RS33220	0.38	-0.1
3,031,404	-		BPHYT_RS33220	0.38	+0.3
3,031,404	-		BPHYT_RS33220	0.38	-0.4
3,031,626	+		BPHYT_RS33220	0.49	-2.6