Strain Fitness in Burkholderia phytofirmans PsJN around BPHYT_RS33055

Experiment: Phenylacetic 5 mM (C)

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Phenylacetic 5 mM (C)
2,991,092	+		BPHYT_RS33045	0.68	-1.1
2,991,385	-		BPHYT_RS33050	0.11	+0.2
2,991,666	+		BPHYT_RS33050	0.53	-2.9
2,991,666	+		BPHYT_RS33050	0.53	-2.9
2,991,827	+		BPHYT_RS33050	0.76	+0.4
2,991,827	+		BPHYT_RS33050	0.76	-1.3
2,992,160	+				-0.1
2,992,179	-				-0.1
2,992,521	+		BPHYT_RS33055	0.30	-2.0
2,992,552	-		BPHYT_RS33055	0.32	+3.5
2,992,573	-		BPHYT_RS33055	0.34	+2.0
2,992,800	+		BPHYT_RS33055	0.48	+0.9
2,993,095	+		BPHYT_RS33055	0.66	-0.5
2,993,096	-		BPHYT_RS33055	0.66	-0.2
2,993,178	-		BPHYT_RS33055	0.71	+1.3
2,993,185	+		BPHYT_RS33055	0.71	-0.6
2,993,445	+		BPHYT_RS33055	0.87	-0.1
2,993,446	-		BPHYT_RS33055	0.87	+0.6
2,993,581	+				-0.3
2,993,717	-				-0.9
2,993,798	-				-0.5
2,993,933	-				+0.8
2,993,937	-				+0.4
2,993,937	-				-0.5
2,994,011	+				-2.5
2,994,062	-				-0.8
2,994,103	+				-0.0
2,994,264	+		BPHYT_RS33060	0.19	-0.8
2,994,563	+		BPHYT_RS33060	0.58	-2.0
2,994,610	+		BPHYT_RS33060	0.64	+0.3