Strain Fitness in Burkholderia phytofirmans PsJN around BPHYT_RS33000
Experiment: Phenylacetic 5 mM (C)
Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.
Per-strain Table
Position | Strand | Gene | LocusTag | Fraction | Phenylacetic 5 mM (C) |
---|---|---|---|---|---|
remove | |||||
2,982,905 | - | BPHYT_RS32995 | 0.69 | -1.6 | |
2,982,915 | + | BPHYT_RS32995 | 0.69 | -0.6 | |
2,982,924 | + | BPHYT_RS32995 | 0.70 | -0.5 | |
2,983,003 | - | BPHYT_RS32995 | 0.75 | -1.6 | |
2,983,054 | - | BPHYT_RS32995 | 0.79 | -1.8 | |
2,983,054 | - | BPHYT_RS32995 | 0.79 | -1.2 | |
2,983,075 | - | BPHYT_RS32995 | 0.80 | +1.0 | |
2,983,735 | + | +2.3 | |||
2,983,831 | + | +0.4 | |||
2,984,058 | + | BPHYT_RS33005 | 0.27 | +3.5 |
Or see this region's nucleotide sequence