Strain Fitness in Burkholderia phytofirmans PsJN around BPHYT_RS32655
Experiment: Phenylacetic 5 mM (C)
Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.
Per-strain Table
Position | Strand | Gene | LocusTag | Fraction | Phenylacetic 5 mM (C) |
---|---|---|---|---|---|
remove | |||||
2,901,380 | - | BPHYT_RS32650 | 0.57 | -0.3 | |
2,901,857 | + | BPHYT_RS32650 | 0.89 | -0.5 | |
2,901,857 | + | BPHYT_RS32650 | 0.89 | +2.7 | |
2,901,858 | - | BPHYT_RS32650 | 0.89 | -1.2 | |
2,902,066 | - | +0.9 | |||
2,902,067 | + | -0.2 | |||
2,902,803 | - | BPHYT_RS32655 | 0.53 | +0.1 | |
2,902,963 | + | BPHYT_RS32655 | 0.71 | +0.0 | |
2,903,072 | - | BPHYT_RS32655 | 0.83 | -1.0 | |
2,903,206 | - | +0.4 | |||
2,903,363 | - | +0.2 | |||
2,903,427 | + | -0.4 | |||
2,903,427 | + | -0.4 | |||
2,903,428 | - | -0.3 | |||
2,903,681 | + | -1.4 |
Or see this region's nucleotide sequence