Strain Fitness in Burkholderia phytofirmans PsJN around BPHYT_RS32645

Experiment: Phenylacetic 5 mM (C)

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Phenylacetic 5 mM (C)
2,898,279	+		BPHYT_RS32640	0.32	+3.8
2,898,279	+		BPHYT_RS32640	0.32	-0.1
2,898,590	-		BPHYT_RS32640	0.58	+0.3
2,898,590	-		BPHYT_RS32640	0.58	+1.5
2,898,907	+		BPHYT_RS32640	0.84	-0.3
2,898,907	+		BPHYT_RS32640	0.84	-1.5
2,899,030	+				+0.4
2,899,030	+				+0.3
2,899,030	+				-0.9
2,899,030	+				+0.0
2,899,030	+				+0.1
2,899,166	+				-0.7
2,899,170	+				+0.6
2,899,170	+				+1.5
2,899,170	+				+1.2
2,899,177	+				-0.9
2,899,181	+				+0.6
2,899,182	-				-1.2
2,899,182	-				-0.4
2,899,292	+				+1.5
2,899,293	-				-2.5
2,899,293	-				-0.1
2,899,438	+		BPHYT_RS32645	0.19	-0.5
2,899,439	-		BPHYT_RS32645	0.19	+0.3
2,899,444	+		BPHYT_RS32645	0.20	+4.5
2,899,444	+		BPHYT_RS32645	0.20	+0.0
2,899,444	+		BPHYT_RS32645	0.20	-0.7
2,899,445	-		BPHYT_RS32645	0.20	-0.9
2,899,682	+		BPHYT_RS32645	0.40	+1.2
2,899,792	+		BPHYT_RS32645	0.49	-2.1
2,899,793	-		BPHYT_RS32645	0.49	-0.8
2,899,793	-		BPHYT_RS32645	0.49	-0.7
2,899,793	-		BPHYT_RS32645	0.49	+1.0
2,899,870	+		BPHYT_RS32645	0.56	-0.4
2,899,871	-		BPHYT_RS32645	0.56	-0.5
2,899,922	-		BPHYT_RS32645	0.60	-0.6
2,899,954	+		BPHYT_RS32645	0.63	+0.7
2,900,031	-		BPHYT_RS32645	0.70	-0.7
2,900,206	-		BPHYT_RS32645	0.84	+0.5
2,900,272	+				-0.4
2,900,332	+				+0.7
2,900,332	+				-0.5
2,900,333	-				+1.7
2,900,457	-				+0.3
2,900,597	+				+0.5
2,900,832	-		BPHYT_RS32650	0.21	+0.2
2,900,918	+		BPHYT_RS32650	0.27	+1.7
2,900,918	+		BPHYT_RS32650	0.27	+0.1
2,900,919	-		BPHYT_RS32650	0.27	+1.1
2,900,919	-		BPHYT_RS32650	0.27	-0.6
2,900,919	-		BPHYT_RS32650	0.27	+2.0
2,900,919	-		BPHYT_RS32650	0.27	+1.1
2,901,018	-		BPHYT_RS32650	0.33	+1.0
2,901,089	+		BPHYT_RS32650	0.38	-0.2
2,901,089	+		BPHYT_RS32650	0.38	+0.9
2,901,089	+		BPHYT_RS32650	0.38	-0.8
2,901,090	-		BPHYT_RS32650	0.38	+0.8
2,901,123	-		BPHYT_RS32650	0.40	+0.9
2,901,310	-		BPHYT_RS32650	0.53	+0.3
2,901,380	-		BPHYT_RS32650	0.57	-0.3