Strain Fitness in Burkholderia phytofirmans PsJN around BPHYT_RS31800
Experiment: Phenylacetic 5 mM (C)
Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.
Per-strain Table
Position | Strand | Gene | LocusTag | Fraction | Phenylacetic 5 mM (C) |
---|---|---|---|---|---|
remove | |||||
2,691,979 | + | BPHYT_RS31795 | 0.16 | -1.4 | |
2,692,159 | - | BPHYT_RS31795 | 0.33 | -2.9 | |
2,692,269 | + | BPHYT_RS31795 | 0.44 | -0.3 | |
2,692,301 | - | BPHYT_RS31795 | 0.47 | -2.3 | |
2,692,301 | - | BPHYT_RS31795 | 0.47 | +0.5 | |
2,692,301 | - | BPHYT_RS31795 | 0.47 | -1.3 | |
2,692,466 | - | BPHYT_RS31795 | 0.64 | +0.5 | |
2,692,654 | - | BPHYT_RS31795 | 0.82 | -0.5 | |
2,692,751 | + | -2.2 | |||
2,692,751 | + | -1.5 | |||
2,692,830 | + | +1.5 | |||
2,692,901 | + | +2.2 | |||
2,693,793 | - | -1.8 | |||
2,693,817 | + | -2.1 | |||
2,693,817 | + | +4.1 | |||
2,693,817 | + | +0.0 | |||
2,693,825 | + | -1.4 | |||
2,694,443 | + | BPHYT_RS31805 | 0.46 | -1.8 | |
2,694,443 | + | BPHYT_RS31805 | 0.46 | +0.1 |
Or see this region's nucleotide sequence