Strain Fitness in Burkholderia phytofirmans PsJN around BPHYT_RS31120

Experiment: Phenylacetic 5 mM (C)

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Phenylacetic 5 mM (C)
2,537,898	-		BPHYT_RS31115	0.75	+0.4
2,538,033	-		BPHYT_RS31115	0.80	+0.5
2,538,033	-		BPHYT_RS31115	0.80	+0.2
2,538,187	+		BPHYT_RS31115	0.85	+0.5
2,538,193	+		BPHYT_RS31115	0.85	+0.1
2,538,209	-		BPHYT_RS31115	0.86	+1.4
2,538,452	-				-0.5
2,538,458	+				+1.4
2,538,623	+				+0.4
2,538,624	-				-0.0
2,539,060	+		BPHYT_RS31120	0.36	+1.0
2,539,061	-		BPHYT_RS31120	0.36	+0.6
2,539,061	-		BPHYT_RS31120	0.36	-0.7
2,539,061	-		BPHYT_RS31120	0.36	-0.4
2,539,699	-				-1.0
2,539,700	+				-0.5
2,539,700	+				-0.2
2,539,786	+		BPHYT_RS31125	0.10	-1.5
2,539,787	-		BPHYT_RS31125	0.11	+0.2
2,539,888	-		BPHYT_RS31125	0.33	-2.4
2,540,212	-				+0.2
2,540,328	+		BPHYT_RS31130	0.19	-0.9
2,540,433	-		BPHYT_RS31130	0.71	+3.0
2,540,433	-		BPHYT_RS31130	0.71	-0.9
2,540,434	+		BPHYT_RS31130	0.71	+1.9
2,540,492	+				-0.9
2,540,492	+				-1.6
2,540,560	-				-0.4
2,540,597	+				-0.2