Strain Fitness in Burkholderia phytofirmans PsJN around BPHYT_RS30950

Experiment: Phenylacetic 5 mM (C)

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Phenylacetic 5 mM (C)
2,498,209	-		BPHYT_RS30945	0.40	+1.5
2,498,233	-		BPHYT_RS30945	0.43	-0.3
2,498,289	+		BPHYT_RS30945	0.48	+0.4
2,498,290	-		BPHYT_RS30945	0.48	-1.1
2,498,442	-		BPHYT_RS30945	0.63	-3.1
2,499,433	-		BPHYT_RS30950	0.19	+0.5
2,500,568	-		BPHYT_RS30950	0.63	-0.4
2,500,978	-		BPHYT_RS30950	0.80	-0.1
2,501,087	+		BPHYT_RS30950	0.84	+3.3
2,501,220	+		BPHYT_RS30950	0.89	+1.2
2,501,223	+		BPHYT_RS30950	0.89	+1.2
2,501,224	-		BPHYT_RS30950	0.89	-1.2
2,501,224	-		BPHYT_RS30950	0.89	-0.4
2,501,245	+				-2.4
2,501,245	+				+0.1
2,501,315	+				-0.5
2,501,386	-				-0.8
2,501,452	-				+0.6
2,501,476	-				-2.7
2,501,532	-				+3.2
2,501,728	-		BPHYT_RS30955	0.17	-1.9
2,502,045	-		BPHYT_RS30955	0.48	+0.2
2,502,125	+		BPHYT_RS30955	0.55	+0.7
2,502,150	-		BPHYT_RS30955	0.58	-0.7
2,502,161	-		BPHYT_RS30955	0.59	+2.6
2,502,258	+		BPHYT_RS30955	0.68	+0.4
2,502,319	+		BPHYT_RS30955	0.74	+0.5
2,502,335	+		BPHYT_RS30955	0.76	+0.2
2,502,336	-		BPHYT_RS30955	0.76	-0.2
2,502,336	-		BPHYT_RS30955	0.76	-4.9