Strain Fitness in Burkholderia phytofirmans PsJN around BPHYT_RS30840

Experiment: Phenylacetic 5 mM (C)

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Phenylacetic 5 mM (C)
2,473,888	+				+0.5
2,473,889	-				-0.1
2,473,892	+				-1.0
2,473,943	+				+1.4
2,474,427	+				-0.4
2,474,481	+				+4.0
2,474,527	-				-0.7
2,474,555	+				+0.6
2,475,190	-		BPHYT_RS30840	0.60	+0.6
2,475,190	-		BPHYT_RS30840	0.60	+0.6
2,475,318	+		BPHYT_RS30840	0.71	+0.6
2,475,591	-				+2.1
2,475,661	+				-0.5
2,475,738	-				-3.3
2,475,857	+				+0.3
2,476,041	+		BPHYT_RS30845	0.29	+0.8
2,476,216	-		BPHYT_RS30845	0.64	+1.6
2,476,404	+				+1.5
2,476,405	-				-0.6
2,476,537	-				+3.0
2,476,541	+				+1.0
2,476,542	-				-0.0
2,476,638	+				+0.8