Strain Fitness in Burkholderia phytofirmans PsJN around BPHYT_RS30575
Experiment: Phenylacetic 5 mM (C)
Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.
Per-strain Table
Position | Strand | Gene | LocusTag | Fraction | Phenylacetic 5 mM (C) |
---|---|---|---|---|---|
remove | |||||
2,416,804 | + | +1.1 | |||
2,417,095 | + | -1.3 | |||
2,417,161 | + | +0.1 | |||
2,417,165 | - | +4.9 | |||
2,417,276 | - | -0.8 | |||
2,417,379 | - | +2.7 | |||
2,418,014 | + | BPHYT_RS30575 | 0.88 | -2.5 | |
2,418,252 | - | -2.3 | |||
2,418,471 | - | -2.3 | |||
2,418,471 | - | +0.5 | |||
2,418,491 | - | -1.3 | |||
2,418,491 | - | -4.0 | |||
2,418,491 | - | -0.3 | |||
2,418,591 | + | +1.7 | |||
2,418,613 | + | BPHYT_RS30580 | 0.11 | -1.3 |
Or see this region's nucleotide sequence