Strain Fitness in Burkholderia phytofirmans PsJN around BPHYT_RS30160
Experiment: Phenylacetic 5 mM (C)
Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.
Per-strain Table
Position | Strand | Gene | LocusTag | Fraction | Phenylacetic 5 mM (C) |
---|---|---|---|---|---|
remove | |||||
2,320,357 | + | BPHYT_RS30155 | 0.49 | -1.2 | |
2,320,836 | - | BPHYT_RS30155 | 0.73 | +0.1 | |
2,321,130 | + | BPHYT_RS30155 | 0.88 | +0.3 | |
2,321,381 | + | BPHYT_RS30160 | 0.12 | -0.3 | |
2,321,623 | + | BPHYT_RS30160 | 0.68 | +0.4 | |
2,321,846 | - | +0.2 | |||
2,321,976 | + | BPHYT_RS30165 | 0.19 | -0.3 | |
2,322,162 | + | BPHYT_RS30165 | 0.35 | -0.1 | |
2,322,217 | - | BPHYT_RS30165 | 0.39 | +1.9 | |
2,322,636 | + | BPHYT_RS30165 | 0.75 | -0.6 | |
2,322,637 | - | BPHYT_RS30165 | 0.75 | +0.8 | |
2,322,649 | + | BPHYT_RS30165 | 0.76 | -0.0 | |
2,322,649 | + | BPHYT_RS30165 | 0.76 | +0.1 |
Or see this region's nucleotide sequence