Strain Fitness in Burkholderia phytofirmans PsJN around BPHYT_RS30145

Experiment: Phenylacetic 5 mM (C)

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Phenylacetic 5 mM (C)
2,314,921	+				-1.3
2,314,921	+				+0.9
2,314,922	-				+0.4
2,314,922	-				-1.2
2,314,989	-				+0.5
2,315,488	-		BPHYT_RS30145	0.16	-0.9
2,315,844	+		BPHYT_RS30145	0.30	+1.3
2,315,844	+		BPHYT_RS30145	0.30	-0.1
2,315,845	-		BPHYT_RS30145	0.30	+0.3
2,315,845	-		BPHYT_RS30145	0.30	-1.2
2,315,922	+		BPHYT_RS30145	0.33	+2.3
2,316,973	+		BPHYT_RS30145	0.73	+1.7
2,316,975	+		BPHYT_RS30145	0.73	-3.2
2,316,975	+		BPHYT_RS30145	0.73	-2.0
2,317,493	-				-1.3
2,317,560	+				-1.8
2,317,661	-				+1.3
2,317,687	-				-1.0
2,317,736	+				-0.4
2,317,739	-				+0.7
2,317,741	-				-0.4
2,317,741	-				+1.4
2,317,770	+				+0.5
2,317,770	+				+5.1
2,317,781	+				+0.0
2,317,899	-				+1.3
2,318,045	-				-0.2
2,318,170	+		BPHYT_RS30150	0.15	-0.9
2,318,336	-		BPHYT_RS30150	0.29	-0.4
2,318,506	+		BPHYT_RS30150	0.44	-0.8
2,318,510	+		BPHYT_RS30150	0.44	-2.9