Strain Fitness in Burkholderia phytofirmans PsJN around BPHYT_RS29385

Experiment: Phenylacetic 5 mM (C)

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Phenylacetic 5 mM (C)
2,146,876	+		BPHYT_RS29380	0.53	+0.5
2,146,977	-		BPHYT_RS29380	0.70	-0.3
2,147,251	-				+0.9
2,147,329	-				-1.2
2,147,346	+				-0.5
2,147,347	-				+0.2
2,147,660	-				+0.7
2,147,705	+				-0.4
2,147,753	-				+2.4
2,148,343	+		BPHYT_RS29385	0.57	-1.1
2,148,392	-		BPHYT_RS29385	0.61	-0.7
2,148,443	-		BPHYT_RS29385	0.65	-0.5
2,148,703	+		BPHYT_RS29385	0.87	+0.7
2,148,703	+		BPHYT_RS29385	0.87	-0.4
2,148,704	-		BPHYT_RS29385	0.87	+1.4
2,148,741	-		BPHYT_RS29385	0.90	-0.8
2,148,815	-				+0.1
2,149,056	+				-1.8
2,149,132	+				-0.1
2,149,230	+				+1.9
2,149,230	+				-0.9
2,149,231	-				+0.1
2,149,231	-				-0.4
2,149,276	-				+0.1
2,149,276	-				-0.6
2,149,286	+				-2.3