Experiment: Phenylacetic 5 mM (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt BPHYT_RS26210 and BPHYT_RS26215 are separated by 93 nucleotides BPHYT_RS26215 and BPHYT_RS26220 are separated by 15 nucleotides BPHYT_RS26220 and BPHYT_RS26225 overlap by 10 nucleotides BPHYT_RS26225 and BPHYT_RS26230 are separated by 77 nucleotides
BPHYT_RS26210: BPHYT_RS26210 - ankyrin, at 1,453,231 to 1,453,767
_RS26210
BPHYT_RS26215: BPHYT_RS26215 - haloacid dehalogenase, at 1,453,861 to 1,454,553
_RS26215
BPHYT_RS26220: BPHYT_RS26220 - 6-phosphogluconate dehydrogenase, at 1,454,569 to 1,455,606
_RS26220
BPHYT_RS26225: BPHYT_RS26225 - hypothetical protein, at 1,455,597 to 1,455,917
_RS26225
BPHYT_RS26230: BPHYT_RS26230 - MFS transporter, at 1,455,995 to 1,457,329
_RS26230
Position (kb) 1454
1455
1456 Strain fitness (log2 ratio) -2
-1
0
1 at 1454.066 kb on + strand, within BPHYT_RS26215 at 1454.067 kb on - strand, within BPHYT_RS26215 at 1454.451 kb on + strand, within BPHYT_RS26215 at 1454.451 kb on + strand, within BPHYT_RS26215 at 1454.518 kb on + strand at 1454.786 kb on + strand, within BPHYT_RS26220 at 1454.907 kb on - strand, within BPHYT_RS26220 at 1455.002 kb on + strand, within BPHYT_RS26220 at 1455.003 kb on - strand, within BPHYT_RS26220 at 1455.219 kb on - strand, within BPHYT_RS26220 at 1455.266 kb on + strand, within BPHYT_RS26220 at 1455.267 kb on - strand, within BPHYT_RS26220 at 1455.267 kb on - strand, within BPHYT_RS26220 at 1455.320 kb on + strand, within BPHYT_RS26220 at 1455.528 kb on + strand at 1455.668 kb on + strand, within BPHYT_RS26225 at 1455.945 kb on + strand at 1456.276 kb on - strand, within BPHYT_RS26230 at 1456.276 kb on - strand, within BPHYT_RS26230 at 1456.276 kb on - strand, within BPHYT_RS26230 at 1456.534 kb on + strand, within BPHYT_RS26230
Per-strain Table
Position Strand Gene LocusTag Fraction Phenylacetic 5 mM (C) remove 1,454,066 + BPHYT_RS26215 0.30 +1.2 1,454,067 - BPHYT_RS26215 0.30 -0.0 1,454,451 + BPHYT_RS26215 0.85 +0.0 1,454,451 + BPHYT_RS26215 0.85 +1.1 1,454,518 + -1.6 1,454,786 + BPHYT_RS26220 0.21 -0.7 1,454,907 - BPHYT_RS26220 0.33 -0.1 1,455,002 + BPHYT_RS26220 0.42 +0.3 1,455,003 - BPHYT_RS26220 0.42 +1.6 1,455,219 - BPHYT_RS26220 0.63 +0.1 1,455,266 + BPHYT_RS26220 0.67 +0.8 1,455,267 - BPHYT_RS26220 0.67 -0.1 1,455,267 - BPHYT_RS26220 0.67 -1.2 1,455,320 + BPHYT_RS26220 0.72 +0.1 1,455,528 + +0.3 1,455,668 + BPHYT_RS26225 0.22 +0.1 1,455,945 + +0.5 1,456,276 - BPHYT_RS26230 0.21 +0.6 1,456,276 - BPHYT_RS26230 0.21 -2.3 1,456,276 - BPHYT_RS26230 0.21 -0.1 1,456,534 + BPHYT_RS26230 0.40 -0.1
Or see this region's nucleotide sequence