Experiment: Phenylacetic 5 mM (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt BPHYT_RS26100 and BPHYT_RS26105 are separated by 69 nucleotides BPHYT_RS26105 and BPHYT_RS26110 overlap by 10 nucleotides BPHYT_RS26110 and BPHYT_RS26115 overlap by 4 nucleotides
BPHYT_RS26100: BPHYT_RS26100 - gamma-glutamyltransferase, at 1,431,124 to 1,432,710
_RS26100
BPHYT_RS26105: BPHYT_RS26105 - hypothetical protein, at 1,432,780 to 1,433,370
_RS26105
BPHYT_RS26110: BPHYT_RS26110 - GntR family transcriptional regulator, at 1,433,361 to 1,434,113
_RS26110
BPHYT_RS26115: BPHYT_RS26115 - polysaccharide deacetylase, at 1,434,110 to 1,435,075
_RS26115
Position (kb) 1432
1433
1434 Strain fitness (log2 ratio) -1
0
1
2
3
4 at 1431.964 kb on + strand, within BPHYT_RS26100 at 1432.299 kb on + strand, within BPHYT_RS26100 at 1432.351 kb on + strand, within BPHYT_RS26100 at 1432.353 kb on + strand, within BPHYT_RS26100 at 1432.354 kb on - strand, within BPHYT_RS26100 at 1432.589 kb on + strand at 1432.759 kb on + strand at 1432.847 kb on + strand, within BPHYT_RS26105 at 1433.331 kb on - strand at 1433.629 kb on + strand, within BPHYT_RS26110 at 1434.157 kb on + strand at 1434.274 kb on - strand, within BPHYT_RS26115
Per-strain Table
Position Strand Gene LocusTag Fraction Phenylacetic 5 mM (C) remove 1,431,964 + BPHYT_RS26100 0.53 -0.1 1,432,299 + BPHYT_RS26100 0.74 -0.4 1,432,351 + BPHYT_RS26100 0.77 +4.1 1,432,353 + BPHYT_RS26100 0.77 -1.6 1,432,354 - BPHYT_RS26100 0.78 +0.5 1,432,589 + +0.9 1,432,759 + +1.0 1,432,847 + BPHYT_RS26105 0.11 -0.2 1,433,331 - -1.1 1,433,629 + BPHYT_RS26110 0.36 +0.2 1,434,157 + +4.2 1,434,274 - BPHYT_RS26115 0.17 -0.3
Or see this region's nucleotide sequence