Strain Fitness in Burkholderia phytofirmans PsJN around BPHYT_RS24795

Experiment: Phenylacetic 5 mM (C)

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Phenylacetic 5 mM (C)
1,129,400	+		BPHYT_RS24790	0.83	-0.1
1,129,400	+		BPHYT_RS24790	0.83	-0.8
1,129,400	+		BPHYT_RS24790	0.83	+1.0
1,129,483	+				-0.3
1,129,616	+				+1.1
1,129,696	+				-0.5
1,129,696	+				-1.2
1,129,715	-				-0.9
1,129,797	-				+0.4
1,129,927	-				-0.3
1,130,060	+				-0.9
1,130,152	-				-2.5
1,130,185	+				+0.5
1,130,185	+				+0.9
1,130,285	+				+0.5
1,130,329	-				+1.0
1,130,430	+		BPHYT_RS24795	0.10	-0.8
1,130,444	-		BPHYT_RS24795	0.12	-1.1
1,130,650	+		BPHYT_RS24795	0.40	-0.8
1,130,651	-		BPHYT_RS24795	0.40	+1.7
1,130,716	+		BPHYT_RS24795	0.49	+0.5
1,130,717	-		BPHYT_RS24795	0.49	-0.7
1,130,884	-		BPHYT_RS24795	0.72	-3.5
1,131,008	-		BPHYT_RS24795	0.88	+0.5
1,131,013	+		BPHYT_RS24795	0.89	-0.0
1,131,155	-				+0.9
1,131,264	+		BPHYT_RS24800	0.12	-0.5
1,131,301	-		BPHYT_RS24800	0.15	-1.2
1,131,301	-		BPHYT_RS24800	0.15	+0.4
1,131,318	+		BPHYT_RS24800	0.16	-0.9
1,131,318	+		BPHYT_RS24800	0.16	-3.0
1,131,319	-		BPHYT_RS24800	0.16	-0.5
1,131,319	-		BPHYT_RS24800	0.16	+0.4
1,132,081	-		BPHYT_RS24800	0.68	-4.7