Strain Fitness in Burkholderia phytofirmans PsJN around BPHYT_RS24355
Experiment: Phenylacetic 5 mM (C)
Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.
Per-strain Table
Position | Strand | Gene | LocusTag | Fraction | Phenylacetic 5 mM (C) |
---|---|---|---|---|---|
remove | |||||
1,029,060 | + | -1.4 | |||
1,029,060 | + | +1.9 | |||
1,029,330 | + | BPHYT_RS24350 | 0.48 | -1.2 | |
1,029,585 | + | BPHYT_RS24350 | 0.89 | +2.5 | |
1,029,586 | - | BPHYT_RS24350 | 0.89 | -0.4 | |
1,029,768 | + | +0.6 | |||
1,029,996 | - | +0.8 | |||
1,029,996 | - | +0.3 | |||
1,030,053 | + | +0.2 | |||
1,030,054 | - | +0.8 | |||
1,030,054 | - | +0.7 | |||
1,030,054 | - | +1.2 | |||
1,030,122 | + | -1.6 | |||
1,030,237 | + | -0.2 | |||
1,030,459 | - | BPHYT_RS24360 | 0.15 | +0.0 | |
1,030,522 | - | BPHYT_RS24360 | 0.20 | -0.8 | |
1,030,522 | - | BPHYT_RS24360 | 0.20 | -0.6 | |
1,030,656 | + | BPHYT_RS24360 | 0.33 | +1.2 | |
1,030,817 | - | BPHYT_RS24360 | 0.48 | -1.0 |
Or see this region's nucleotide sequence