Strain Fitness in Burkholderia phytofirmans PsJN around BPHYT_RS22055
Experiment: Phenylacetic 5 mM (C)
Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.
Per-strain Table
Position | Strand | Gene | LocusTag | Fraction | Phenylacetic 5 mM (C) |
---|---|---|---|---|---|
remove | |||||
502,836 | + | BPHYT_RS22050 | 0.61 | -0.4 | |
503,118 | + | BPHYT_RS22050 | 0.78 | -1.5 | |
503,640 | + | +1.7 | |||
504,063 | - | BPHYT_RS22055 | 0.71 | -1.8 | |
504,193 | - | +0.2 | |||
504,263 | + | +1.4 | |||
504,264 | - | -0.1 | |||
504,266 | - | -0.9 | |||
504,266 | - | +0.6 | |||
504,266 | - | +0.3 | |||
504,270 | - | +1.4 | |||
504,270 | - | +2.0 | |||
504,274 | - | +0.2 | |||
504,358 | - | -0.3 | |||
504,358 | - | +0.6 | |||
504,441 | - | +0.3 | |||
504,494 | - | -0.5 | |||
504,544 | - | +1.7 | |||
504,812 | + | +1.3 | |||
504,813 | - | +0.9 | |||
504,813 | - | -2.6 | |||
504,813 | - | -0.7 | |||
505,145 | + | +2.6 | |||
505,146 | - | -0.1 | |||
505,146 | - | +0.6 |
Or see this region's nucleotide sequence