Strain Fitness in Burkholderia phytofirmans PsJN around BPHYT_RS17885

Experiment: Phenylacetic 5 mM (C)

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Phenylacetic 5 mM (C)
4,037,675	+		BPHYT_RS17880	0.31	-0.7
4,037,675	+		BPHYT_RS17880	0.31	+0.5
4,037,675	+		BPHYT_RS17880	0.31	-0.7
4,037,676	-		BPHYT_RS17880	0.31	+0.9
4,037,753	-		BPHYT_RS17880	0.38	+1.3
4,037,839	+		BPHYT_RS17880	0.45	+0.3
4,037,839	+		BPHYT_RS17880	0.45	+0.5
4,037,839	+		BPHYT_RS17880	0.45	-0.7
4,037,840	-		BPHYT_RS17880	0.45	-1.1
4,037,840	-		BPHYT_RS17880	0.45	-0.9
4,037,840	-		BPHYT_RS17880	0.45	+1.3
4,038,007	+		BPHYT_RS17880	0.59	+0.8
4,038,007	+		BPHYT_RS17880	0.59	-1.0
4,038,119	+		BPHYT_RS17880	0.68	-0.0
4,038,119	+		BPHYT_RS17880	0.68	+0.8
4,038,120	-		BPHYT_RS17880	0.68	-1.7
4,038,120	-		BPHYT_RS17880	0.68	-1.3
4,038,477	+				+0.1
4,038,478	-				+0.9
4,038,711	+		BPHYT_RS17885	0.13	+0.3
4,038,712	-		BPHYT_RS17885	0.13	-3.3
4,038,813	-		BPHYT_RS17885	0.22	+3.4
4,039,179	+		BPHYT_RS17885	0.56	-3.7
4,039,299	+		BPHYT_RS17885	0.67	-3.3
4,039,300	-		BPHYT_RS17885	0.67	-4.2
4,039,428	+		BPHYT_RS17885	0.79	-3.1
4,039,429	-		BPHYT_RS17885	0.79	-1.6
4,039,429	-		BPHYT_RS17885	0.79	-2.3
4,039,645	+				-3.0
4,039,645	+				-3.0
4,039,651	+				-1.7
4,039,652	-				-0.8
4,039,652	-				+1.6
4,039,652	-				+0.7
4,039,662	-				-0.4
4,039,778	-		BPHYT_RS17890	0.21	-0.7
4,039,797	-		BPHYT_RS17890	0.25	-1.2
4,039,899	-		BPHYT_RS17890	0.43	-2.9
4,040,173	+				-1.2
4,040,183	-				-2.4
4,040,253	+				-3.2
4,040,337	-				-1.9
4,040,383	+				-3.0
4,040,503	+				-1.7
4,040,578	-				-0.0