Strain Fitness in Burkholderia phytofirmans PsJN around BPHYT_RS17735

Experiment: Phenylacetic 5 mM (C)

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Phenylacetic 5 mM (C)
4,004,275	-		BPHYT_RS17725	0.36	+0.4
4,004,398	-		BPHYT_RS17725	0.87	+0.3
4,004,398	-		BPHYT_RS17725	0.87	+0.2
4,004,398	-		BPHYT_RS17725	0.87	-3.0
4,004,398	-		BPHYT_RS17725	0.87	-1.0
4,004,398	-		BPHYT_RS17725	0.87	+0.2
4,004,398	-		BPHYT_RS17725	0.87	+0.8
4,004,429	-				+0.8
4,004,429	-				+0.3
4,004,429	-				-0.3
4,004,429	-				+0.9
4,004,429	-				-0.1
4,004,429	-				-0.1
4,004,625	-		BPHYT_RS17730	0.24	-0.0
4,004,650	-		BPHYT_RS17730	0.27	-0.5
4,004,650	-		BPHYT_RS17730	0.27	+0.1
4,004,753	-		BPHYT_RS17730	0.41	+0.4
4,004,794	-		BPHYT_RS17730	0.46	-1.7
4,004,794	-		BPHYT_RS17730	0.46	+0.4
4,004,890	-		BPHYT_RS17730	0.59	+0.2
4,004,890	-		BPHYT_RS17730	0.59	+1.1
4,004,908	-		BPHYT_RS17730	0.61	+1.2
4,005,175	-				+0.2
4,005,287	-				-0.6
4,005,558	-		BPHYT_RS17735	0.39	-1.1
4,005,819	-		BPHYT_RS17735	0.67	-2.7
4,005,822	-		BPHYT_RS17735	0.67	-0.3
4,006,133	-				+0.8
4,006,261	-				-2.4
4,006,268	+				-3.0
4,006,269	-				+0.4
4,006,269	-				-0.3
4,006,269	-				-0.3
4,006,269	-				+0.1
4,006,294	-				+0.1
4,006,294	-				+0.3
4,006,693	+		BPHYT_RS17745	0.16	-1.1
4,006,694	-		BPHYT_RS17745	0.16	-1.5
4,006,733	-		BPHYT_RS17745	0.23	-1.2
4,006,733	-		BPHYT_RS17745	0.23	-2.2
4,006,760	-		BPHYT_RS17745	0.27	-3.1
4,006,897	+		BPHYT_RS17745	0.48	-0.7
4,006,898	-		BPHYT_RS17745	0.49	-1.5
4,006,898	-		BPHYT_RS17745	0.49	-2.3
4,006,901	+		BPHYT_RS17745	0.49	-2.1
4,006,901	+		BPHYT_RS17745	0.49	+1.7