Strain Fitness in Burkholderia phytofirmans PsJN around BPHYT_RS16885
Experiment: Phenylacetic 5 mM (C)
Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.
Per-strain Table
Position | Strand | Gene | LocusTag | Fraction | Phenylacetic 5 mM (C) |
---|---|---|---|---|---|
remove | |||||
3,829,936 | - | BPHYT_RS16880 | 0.74 | +1.0 | |
3,830,502 | + | -1.7 | |||
3,830,502 | + | -0.0 | |||
3,830,532 | - | +0.0 | |||
3,830,551 | - | -0.2 | |||
3,830,551 | - | -2.2 | |||
3,830,551 | - | -0.8 | |||
3,830,551 | - | +3.7 | |||
3,830,556 | + | -1.1 | |||
3,830,557 | - | -0.0 | |||
3,830,587 | - | -0.1 | |||
3,831,805 | + | -0.5 | |||
3,832,541 | - | BPHYT_RS16895 | 0.25 | -0.5 | |
3,832,583 | + | BPHYT_RS16895 | 0.34 | -0.9 |
Or see this region's nucleotide sequence