Strain Fitness in Burkholderia phytofirmans PsJN around BPHYT_RS16880

Experiment: Phenylacetic 5 mM (C)

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Phenylacetic 5 mM (C)
3,827,321	+				-0.0
3,827,321	+				+0.4
3,827,322	-				-2.9
3,827,322	-				-0.7
3,827,345	+				-0.1
3,827,346	-				-0.2
3,827,346	-				+0.7
3,827,346	-				-2.3
3,827,346	-				+1.1
3,827,348	+				-0.0
3,827,348	+				-0.9
3,827,349	-				-1.4
3,827,349	-				-2.7
3,827,564	+		BPHYT_RS16875	0.30	-0.6
3,827,581	+		BPHYT_RS16875	0.32	+0.1
3,827,582	-		BPHYT_RS16875	0.32	-0.1
3,827,681	+		BPHYT_RS16875	0.45	+0.1
3,827,682	-		BPHYT_RS16875	0.45	+0.1
3,827,682	-		BPHYT_RS16875	0.45	-1.6
3,827,682	-		BPHYT_RS16875	0.45	-0.2
3,827,682	-		BPHYT_RS16875	0.45	+1.0
3,827,708	+		BPHYT_RS16875	0.48	-0.3
3,827,879	+		BPHYT_RS16875	0.69	+0.5
3,827,879	+		BPHYT_RS16875	0.69	+0.0
3,827,880	-		BPHYT_RS16875	0.69	-2.9
3,827,882	+		BPHYT_RS16875	0.70	-1.7
3,827,883	-		BPHYT_RS16875	0.70	-2.7
3,827,997	+				-0.6
3,828,056	+				-0.7
3,828,056	+				+0.7
3,828,057	-				+0.1
3,828,057	-				+0.7
3,828,057	-				+0.8
3,828,057	-				+0.3
3,828,089	+				-0.1
3,828,090	-				+1.1
3,828,122	+				-0.5
3,828,145	-				-0.4
3,828,145	-				+1.7
3,828,145	-				+0.1
3,828,366	-				+0.9
3,828,944	+		BPHYT_RS16880	0.31	+2.6
3,828,945	-		BPHYT_RS16880	0.31	+1.7
3,829,936	-		BPHYT_RS16880	0.74	+1.0
3,830,502	+				-1.7
3,830,502	+				-0.0
3,830,532	-				+0.0
3,830,551	-				-0.2
3,830,551	-				-2.2
3,830,551	-				-0.8
3,830,551	-				+3.7
3,830,556	+				-1.1
3,830,557	-				-0.0
3,830,587	-				-0.1