Strain Fitness in Burkholderia phytofirmans PsJN around BPHYT_RS16845

Experiment: Phenylacetic 5 mM (C)

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Phenylacetic 5 mM (C)
3,822,246	-		BPHYT_RS16840	0.68	-2.6
3,822,246	-		BPHYT_RS16840	0.68	-1.9
3,822,419	+		BPHYT_RS16840	0.77	-1.4
3,822,420	-		BPHYT_RS16840	0.77	-0.6
3,823,024	+				-0.6
3,823,025	-				-0.2
3,823,111	+				-0.4
3,823,111	+				-0.3
3,823,112	-				+0.7
3,823,132	+				-1.8
3,823,203	+				+0.1
3,823,495	+		BPHYT_RS16845	0.38	-0.0
3,823,496	-		BPHYT_RS16845	0.38	-0.2
3,823,496	-		BPHYT_RS16845	0.38	+0.8
3,823,512	+		BPHYT_RS16845	0.40	-0.7
3,823,584	+		BPHYT_RS16845	0.48	-3.2
3,823,585	-		BPHYT_RS16845	0.49	-2.0
3,823,665	+		BPHYT_RS16845	0.58	+0.7
3,823,665	+		BPHYT_RS16845	0.58	+1.6
3,823,666	-		BPHYT_RS16845	0.58	+1.7
3,823,666	-		BPHYT_RS16845	0.58	+0.4
3,823,680	+		BPHYT_RS16845	0.59	+0.5
3,823,889	+		BPHYT_RS16845	0.83	-2.7
3,823,898	+		BPHYT_RS16845	0.84	-1.0
3,823,899	-		BPHYT_RS16845	0.85	+0.5
3,823,947	+				-4.2
3,824,006	-				+1.0
3,824,006	-				-0.1
3,824,032	-				-0.6
3,824,191	-		BPHYT_RS16850	0.10	-1.6
3,824,304	+		BPHYT_RS16850	0.38	+0.1
3,824,304	+		BPHYT_RS16850	0.38	+1.1
3,824,304	+		BPHYT_RS16850	0.38	+1.3
3,824,304	+		BPHYT_RS16850	0.38	-0.9
3,824,304	+		BPHYT_RS16850	0.38	-0.4
3,824,304	+		BPHYT_RS16850	0.38	+0.0
3,824,304	+		BPHYT_RS16850	0.38	-1.3
3,824,304	+		BPHYT_RS16850	0.38	-1.1
3,824,304	+		BPHYT_RS16850	0.38	-1.2
3,824,304	+		BPHYT_RS16850	0.38	+0.8
3,824,305	-		BPHYT_RS16850	0.38	-0.6
3,824,305	-		BPHYT_RS16850	0.38	+0.0
3,824,305	-		BPHYT_RS16850	0.38	+0.7
3,824,305	-		BPHYT_RS16850	0.38	+0.8
3,824,305	-		BPHYT_RS16850	0.38	-0.5
3,824,305	-		BPHYT_RS16850	0.38	-0.1
3,824,305	-		BPHYT_RS16850	0.38	-1.7
3,824,403	+		BPHYT_RS16850	0.62	+0.2
3,824,403	+		BPHYT_RS16850	0.62	-0.9
3,824,403	+		BPHYT_RS16850	0.62	+0.6
3,824,403	+		BPHYT_RS16850	0.62	+0.6
3,824,403	+		BPHYT_RS16850	0.62	-0.0
3,824,403	+		BPHYT_RS16850	0.62	-1.8
3,824,403	+		BPHYT_RS16850	0.62	+0.7
3,824,403	+		BPHYT_RS16850	0.62	-1.3
3,824,403	+		BPHYT_RS16850	0.62	-0.2
3,824,403	+		BPHYT_RS16850	0.62	+1.3
3,824,403	+		BPHYT_RS16850	0.62	-0.8
3,824,404	-		BPHYT_RS16850	0.62	+0.1
3,824,404	-		BPHYT_RS16850	0.62	-3.5
3,824,404	-		BPHYT_RS16850	0.62	+1.5
3,824,404	-		BPHYT_RS16850	0.62	+0.6
3,824,404	-		BPHYT_RS16850	0.62	+0.6
3,824,404	-		BPHYT_RS16850	0.62	-0.7
3,824,409	+		BPHYT_RS16850	0.63	+3.6
3,824,409	+		BPHYT_RS16850	0.63	+0.1
3,824,433	+		BPHYT_RS16850	0.69	+5.2
3,824,434	-		BPHYT_RS16850	0.69	+0.8
3,824,572	-				+0.0
3,824,572	-				-0.6
3,824,719	+		BPHYT_RS16855	0.19	-0.5
3,824,720	-		BPHYT_RS16855	0.19	-0.6
3,824,811	+		BPHYT_RS16855	0.31	+0.2