Strain Fitness in Burkholderia phytofirmans PsJN around BPHYT_RS16270

Experiment: Phenylacetic 5 mM (C)

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Phenylacetic 5 mM (C)
3,693,601	+		BPHYT_RS16265	0.77	-1.6
3,693,878	+				-2.6
3,693,879	-				+0.2
3,694,471	-				-3.4
3,694,471	-				-3.3
3,694,472	+				-1.3
3,694,473	-				-5.3
3,694,497	-				-2.5
3,695,154	-		BPHYT_RS16270	0.64	-2.6
3,695,154	-		BPHYT_RS16270	0.64	-3.4
3,695,154	-		BPHYT_RS16270	0.64	-3.6
3,695,154	-		BPHYT_RS16270	0.64	-4.1
3,695,570	-				-0.9
3,695,752	+				-2.5
3,695,752	+				-1.0
3,695,955	+		BPHYT_RS16275	0.32	-0.2
3,695,956	-		BPHYT_RS16275	0.32	+0.2
3,695,956	-		BPHYT_RS16275	0.32	+0.5
3,696,006	-		BPHYT_RS16275	0.48	-3.0
3,696,006	-		BPHYT_RS16275	0.48	-1.9
3,696,421	-		BPHYT_RS16280	0.33	-0.1
3,696,503	+		BPHYT_RS16280	0.44	-0.9
3,696,504	-		BPHYT_RS16280	0.44	-2.5
3,696,506	+		BPHYT_RS16280	0.45	-1.5
3,696,506	+		BPHYT_RS16280	0.45	-1.6
3,696,507	-		BPHYT_RS16280	0.45	-1.3
3,696,507	-		BPHYT_RS16280	0.45	+4.3
3,696,507	-		BPHYT_RS16280	0.45	-0.3
3,696,507	-		BPHYT_RS16280	0.45	-0.3
3,696,507	-		BPHYT_RS16280	0.45	-1.0
3,696,507	-		BPHYT_RS16280	0.45	-0.6
3,696,527	+		BPHYT_RS16280	0.48	-0.4
3,696,527	+		BPHYT_RS16280	0.48	+0.3
3,696,527	+		BPHYT_RS16280	0.48	-0.0
3,696,563	+		BPHYT_RS16280	0.52	-0.7
3,696,564	-		BPHYT_RS16280	0.52	+0.9
3,696,564	-		BPHYT_RS16280	0.52	-0.3
3,696,564	-		BPHYT_RS16280	0.52	+0.7
3,696,564	-		BPHYT_RS16280	0.52	-3.3