Strain Fitness in Burkholderia phytofirmans PsJN around BPHYT_RS16260

Experiment: Phenylacetic 5 mM (C)

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Phenylacetic 5 mM (C)
3,690,166	-				+0.3
3,690,427	-		BPHYT_RS16255	0.34	+0.7
3,690,445	-		BPHYT_RS16255	0.36	-2.3
3,690,445	-		BPHYT_RS16255	0.36	-2.7
3,690,445	-		BPHYT_RS16255	0.36	-4.9
3,690,445	-		BPHYT_RS16255	0.36	-2.3
3,690,446	+		BPHYT_RS16255	0.36	+1.7
3,690,447	-		BPHYT_RS16255	0.36	-1.6
3,690,447	-		BPHYT_RS16255	0.36	-1.5
3,690,943	-				-1.1
3,690,943	-				-1.3
3,690,943	-				-2.0
3,691,007	-				-1.6
3,691,099	+				-1.6
3,691,100	-				-1.2
3,691,179	+				-2.5
3,691,180	-				-1.6
3,692,215	-				+0.2
3,692,223	-				+0.8
3,692,495	-				+0.6
3,692,495	-				+0.1
3,692,526	-				-1.0
3,692,526	-				-1.0
3,692,594	-				-0.8
3,692,684	-		BPHYT_RS16265	0.14	-1.2
3,693,126	-		BPHYT_RS16265	0.44	+0.7