Strain Fitness in Burkholderia phytofirmans PsJN around BPHYT_RS16250

Experiment: Phenylacetic 5 mM (C)

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Phenylacetic 5 mM (C)
3,688,389	-		BPHYT_RS16245	0.28	-0.1
3,688,389	-		BPHYT_RS16245	0.28	+2.1
3,688,611	-		BPHYT_RS16245	0.46	-3.0
3,688,770	-		BPHYT_RS16245	0.60	-1.8
3,688,915	-		BPHYT_RS16245	0.72	-2.2
3,688,963	-		BPHYT_RS16245	0.76	-5.0
3,689,257	-				+2.5
3,689,257	-				+0.4
3,689,257	-				-2.6
3,689,301	+				+1.9
3,689,301	+				+4.3
3,689,301	+				+0.5
3,689,302	-				-1.6
3,689,302	-				-2.2
3,689,374	-				-1.1
3,689,587	-		BPHYT_RS16250	0.41	-1.6
3,689,894	-				-0.9
3,689,894	-				+0.4
3,690,016	-				+0.2
3,690,166	-				+0.3
3,690,427	-		BPHYT_RS16255	0.34	+0.7
3,690,445	-		BPHYT_RS16255	0.36	-2.3
3,690,445	-		BPHYT_RS16255	0.36	-2.7
3,690,445	-		BPHYT_RS16255	0.36	-4.9
3,690,445	-		BPHYT_RS16255	0.36	-2.3
3,690,446	+		BPHYT_RS16255	0.36	+1.7
3,690,447	-		BPHYT_RS16255	0.36	-1.6
3,690,447	-		BPHYT_RS16255	0.36	-1.5