Strain Fitness in Burkholderia phytofirmans PsJN around BPHYT_RS15550

Experiment: Phenylacetic 5 mM (C)

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Phenylacetic 5 mM (C)
3,527,903	+				+0.2
3,527,909	+				-0.0
3,527,954	+				+0.2
3,527,955	-				+0.7
3,528,079	+		BPHYT_RS15545	0.18	-1.3
3,528,079	+		BPHYT_RS15545	0.18	+0.3
3,528,080	-		BPHYT_RS15545	0.18	+2.1
3,528,089	+		BPHYT_RS15545	0.19	-1.2
3,528,908	+				+0.8
3,529,765	+		BPHYT_RS15550	0.89	+0.6
3,529,766	-		BPHYT_RS15550	0.89	+0.6
3,529,766	-		BPHYT_RS15550	0.89	-1.2
3,530,215	+		BPHYT_RS15555	0.14	+1.6
3,530,215	+		BPHYT_RS15555	0.14	-1.0
3,530,216	-		BPHYT_RS15555	0.14	+0.1
3,530,216	-		BPHYT_RS15555	0.14	-0.7
3,530,382	+		BPHYT_RS15555	0.27	-0.1
3,530,383	-		BPHYT_RS15555	0.27	+0.4
3,530,495	-		BPHYT_RS15555	0.36	+0.1
3,530,552	-		BPHYT_RS15555	0.41	-0.2
3,530,560	+		BPHYT_RS15555	0.41	+0.7
3,530,560	+		BPHYT_RS15555	0.41	+0.4
3,530,560	+		BPHYT_RS15555	0.41	+0.3
3,530,560	+		BPHYT_RS15555	0.41	-0.0
3,530,560	+		BPHYT_RS15555	0.41	-0.3
3,530,560	+		BPHYT_RS15555	0.41	-0.9
3,530,561	-		BPHYT_RS15555	0.41	+0.2
3,530,765	-		BPHYT_RS15555	0.58	-0.0
3,530,824	+		BPHYT_RS15555	0.62	-0.1
3,530,825	-		BPHYT_RS15555	0.62	-1.1
3,530,834	+		BPHYT_RS15555	0.63	-0.2
3,530,870	-		BPHYT_RS15555	0.66	+0.3
3,530,870	-		BPHYT_RS15555	0.66	+0.2