Strain Fitness in Burkholderia phytofirmans PsJN around BPHYT_RS15540

Experiment: Phenylacetic 5 mM (C)

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Phenylacetic 5 mM (C)
3,524,931	-		BPHYT_RS15535	0.43	+0.6
3,524,992	-		BPHYT_RS15535	0.47	+1.5
3,524,993	+		BPHYT_RS15535	0.47	+0.1
3,524,994	-		BPHYT_RS15535	0.47	+1.7
3,525,281	+		BPHYT_RS15535	0.65	+0.5
3,525,281	+		BPHYT_RS15535	0.65	+0.1
3,525,566	+		BPHYT_RS15535	0.84	-0.1
3,525,566	+		BPHYT_RS15535	0.84	-0.1
3,525,626	+		BPHYT_RS15535	0.87	+2.0
3,525,898	-				+1.9
3,525,910	+				+0.0
3,525,978	-				+1.0
3,526,156	+		BPHYT_RS15540	0.13	-2.7
3,526,156	+		BPHYT_RS15540	0.13	+0.4
3,526,156	+		BPHYT_RS15540	0.13	-2.0
3,526,157	-		BPHYT_RS15540	0.13	-1.2
3,526,904	-		BPHYT_RS15540	0.52	+0.3
3,527,012	+		BPHYT_RS15540	0.58	-0.9
3,527,012	+		BPHYT_RS15540	0.58	-0.5
3,527,013	-		BPHYT_RS15540	0.58	-2.0
3,527,013	-		BPHYT_RS15540	0.58	-1.1
3,527,014	+		BPHYT_RS15540	0.58	-0.7
3,527,077	+		BPHYT_RS15540	0.61	-0.3
3,527,397	-		BPHYT_RS15540	0.78	-0.3
3,527,903	+				+0.2
3,527,909	+				-0.0
3,527,954	+				+0.2
3,527,955	-				+0.7
3,528,079	+		BPHYT_RS15545	0.18	-1.3
3,528,079	+		BPHYT_RS15545	0.18	+0.3
3,528,080	-		BPHYT_RS15545	0.18	+2.1
3,528,089	+		BPHYT_RS15545	0.19	-1.2