Strain Fitness in Burkholderia phytofirmans PsJN around BPHYT_RS14505

Experiment: Phenylacetic 5 mM (C)

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Phenylacetic 5 mM (C)
3,307,239	+		BPHYT_RS14500	0.50	+1.2
3,307,239	+		BPHYT_RS14500	0.50	-1.4
3,307,588	-		BPHYT_RS14500	0.77	-1.1
3,307,951	+				+0.3
3,307,971	+				+0.6
3,307,971	+				-0.7
3,307,971	+				+1.0
3,307,971	+				+0.3
3,307,972	-				-0.0
3,307,972	-				+0.7
3,308,035	-		BPHYT_RS14505	0.22	-0.7
3,308,181	+		BPHYT_RS14505	0.75	-1.7
3,308,181	+		BPHYT_RS14505	0.75	-2.9
3,308,181	+		BPHYT_RS14505	0.75	-1.6
3,308,309	+		BPHYT_RS14510	0.12	+0.8
3,308,462	+		BPHYT_RS14510	0.44	-0.4
3,308,492	+		BPHYT_RS14510	0.50	+0.0
3,308,493	-		BPHYT_RS14510	0.50	-0.7
3,308,507	+		BPHYT_RS14510	0.53	-0.1
3,308,507	+		BPHYT_RS14510	0.53	-1.5
3,308,508	-		BPHYT_RS14510	0.53	+1.0
3,308,508	-		BPHYT_RS14510	0.53	-4.0
3,308,799	+				+0.8
3,308,951	+				+0.6
3,309,098	+		BPHYT_RS14515	0.19	-0.2
3,309,198	+		BPHYT_RS14515	0.26	+0.1
3,309,199	-		BPHYT_RS14515	0.26	+1.2
3,309,199	-		BPHYT_RS14515	0.26	-3.2
3,309,199	-		BPHYT_RS14515	0.26	-1.6