Strain Fitness in Burkholderia phytofirmans PsJN around BPHYT_RS13955

Experiment: Phenylacetic 5 mM (C)

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Phenylacetic 5 mM (C)
3,187,165	-		BPHYT_RS13950	0.58	-1.6
3,187,258	-		BPHYT_RS13950	0.68	-1.0
3,187,419	+		BPHYT_RS13950	0.85	-0.8
3,187,419	+		BPHYT_RS13950	0.85	-1.2
3,187,420	-		BPHYT_RS13950	0.85	-0.4
3,187,657	+		BPHYT_RS13955	0.20	+0.2
3,187,657	+		BPHYT_RS13955	0.20	-0.5
3,187,657	+		BPHYT_RS13955	0.20	+0.9
3,187,658	-		BPHYT_RS13955	0.20	-0.8
3,187,658	-		BPHYT_RS13955	0.20	-2.6
3,187,801	+		BPHYT_RS13955	0.52	-0.5
3,187,876	+		BPHYT_RS13955	0.69	-1.6
3,187,900	+		BPHYT_RS13955	0.74	-0.8
3,187,906	+		BPHYT_RS13955	0.76	-2.5
3,187,906	+		BPHYT_RS13955	0.76	-1.5
3,187,906	+		BPHYT_RS13955	0.76	-0.8
3,187,907	-		BPHYT_RS13955	0.76	-0.3
3,187,933	+		BPHYT_RS13955	0.82	-3.6
3,188,090	-				-1.0
3,188,136	+				+0.2
3,188,588	+		BPHYT_RS13960	0.79	+1.7
3,188,740	+				+0.6
3,188,740	+				+1.5
3,188,740	+				+0.6
3,188,741	-				-0.5
3,188,741	-				-0.7
3,188,802	+				-0.0
3,188,803	-				+1.0
3,188,823	+				-0.2