Strain Fitness in Burkholderia phytofirmans PsJN around BPHYT_RS13705

Experiment: Phenylacetic 5 mM (C)

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Phenylacetic 5 mM (C)
3,121,865	+		BPHYT_RS13700	0.36	+0.4
3,121,866	-		BPHYT_RS13700	0.36	+2.5
3,121,866	-		BPHYT_RS13700	0.36	+0.3
3,122,001	-		BPHYT_RS13700	0.45	+0.0
3,122,001	-		BPHYT_RS13700	0.45	+1.8
3,122,122	-		BPHYT_RS13700	0.53	-0.6
3,122,235	+		BPHYT_RS13700	0.61	+2.0
3,122,596	+		BPHYT_RS13700	0.86	-1.2
3,122,597	-		BPHYT_RS13700	0.86	+1.0
3,123,495	+		BPHYT_RS13705	0.58	-1.3
3,123,495	+		BPHYT_RS13705	0.58	-3.7
3,123,496	-		BPHYT_RS13705	0.58	-5.0
3,123,630	+		BPHYT_RS13705	0.70	-1.5
3,123,630	+		BPHYT_RS13705	0.70	-0.8
3,123,995	-				-5.1
3,123,995	-				-0.8
3,123,997	+				-3.5
3,123,998	-				-3.8
3,123,998	-				-3.1
3,123,998	-				-4.4
3,124,062	-				-0.7
3,124,062	-				-0.1
3,124,063	+				-0.1
3,124,063	+				+0.0
3,124,064	-				+1.7
3,124,212	+				-0.2
3,124,212	+				-0.8
3,124,707	-		BPHYT_RS13710	0.19	+3.5
3,124,961	-		BPHYT_RS13710	0.32	+0.6