Strain Fitness in Burkholderia phytofirmans PsJN around BPHYT_RS13545

Experiment: Phenylacetic 5 mM (C)

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Phenylacetic 5 mM (C)
3,088,121	+		BPHYT_RS13540	0.10	-0.8
3,088,122	-		BPHYT_RS13540	0.10	-1.0
3,088,123	+		BPHYT_RS13540	0.10	-2.2
3,088,124	-		BPHYT_RS13540	0.10	-1.0
3,088,124	-		BPHYT_RS13540	0.10	-1.9
3,088,124	-		BPHYT_RS13540	0.10	-1.6
3,088,124	-		BPHYT_RS13540	0.10	-4.2
3,088,124	-		BPHYT_RS13540	0.10	-2.5
3,088,132	+		BPHYT_RS13540	0.11	-2.1
3,088,132	+		BPHYT_RS13540	0.11	-1.4
3,088,133	-		BPHYT_RS13540	0.11	-0.5
3,088,133	-		BPHYT_RS13540	0.11	-4.3
3,088,133	-		BPHYT_RS13540	0.11	-4.1
3,088,133	-		BPHYT_RS13540	0.11	-1.5
3,088,133	-		BPHYT_RS13540	0.11	+0.4
3,088,133	-		BPHYT_RS13540	0.11	-1.7
3,088,133	-		BPHYT_RS13540	0.11	-1.5
3,088,133	-		BPHYT_RS13540	0.11	-0.5
3,088,216	+		BPHYT_RS13540	0.21	-0.3
3,088,217	-		BPHYT_RS13540	0.21	-0.5
3,088,217	-		BPHYT_RS13540	0.21	-0.9
3,088,217	-		BPHYT_RS13540	0.21	-0.3
3,088,331	-		BPHYT_RS13540	0.33	-1.2
3,088,454	-		BPHYT_RS13540	0.47	-0.0
3,088,745	-		BPHYT_RS13540	0.79	-0.6
3,088,837	+		BPHYT_RS13540	0.89	-1.4
3,088,838	-		BPHYT_RS13540	0.89	-1.8
3,089,471	+		BPHYT_RS13545	0.18	-2.2
3,089,613	-		BPHYT_RS13545	0.25	-0.9
3,089,863	-		BPHYT_RS13545	0.37	-0.2
3,089,863	-		BPHYT_RS13545	0.37	-4.7
3,089,880	+		BPHYT_RS13545	0.38	-3.4
3,089,982	+		BPHYT_RS13545	0.43	-2.7
3,090,199	+		BPHYT_RS13545	0.53	-2.9
3,090,601	+		BPHYT_RS13545	0.72	-1.1
3,090,800	-		BPHYT_RS13545	0.81	-0.6
3,091,749	-		BPHYT_RS13550	0.38	-0.5
3,091,749	-		BPHYT_RS13550	0.38	-0.8
3,092,013	-		BPHYT_RS13550	0.60	-0.9
3,092,025	-		BPHYT_RS13550	0.61	-1.0