Strain Fitness in Burkholderia phytofirmans PsJN around BPHYT_RS10420

Experiment: Phenylacetic 5 mM (C)

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Phenylacetic 5 mM (C)
2,367,440	-		BPHYT_RS10415	0.67	-2.9
2,367,440	-		BPHYT_RS10415	0.67	-0.3
2,367,650	-		BPHYT_RS10415	0.89	-0.6
2,367,921	+				-0.7
2,368,128	+				-0.2
2,368,448	-		BPHYT_RS10420	0.17	-0.6
2,368,451	-		BPHYT_RS10420	0.17	-0.2
2,368,451	-		BPHYT_RS10420	0.17	-1.6
2,368,607	+		BPHYT_RS10420	0.27	+4.8
2,368,825	-		BPHYT_RS10420	0.41	-1.0
2,368,973	-		BPHYT_RS10420	0.50	-0.1
2,369,426	-		BPHYT_RS10420	0.80	-2.3
2,370,020	+		BPHYT_RS10425	0.26	+0.2
2,370,021	-		BPHYT_RS10425	0.26	-1.8
2,370,159	+		BPHYT_RS10425	0.43	-1.1
2,370,419	+		BPHYT_RS10425	0.74	-0.4
2,370,507	+		BPHYT_RS10425	0.85	+0.1
2,370,508	-		BPHYT_RS10425	0.85	-0.7
2,370,527	+		BPHYT_RS10425	0.87	-3.3
2,370,596	+				-0.0
2,370,597	-				+0.0
2,370,659	-				+0.2
2,370,674	-				-0.1
2,370,689	-				+0.1