Strain Fitness in Burkholderia phytofirmans PsJN around BPHYT_RS09815

Experiment: Phenylacetic 5 mM (C)

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Phenylacetic 5 mM (C)
2,228,082	+		BPHYT_RS09805	0.36	+0.6
2,228,091	+		BPHYT_RS09805	0.37	-0.3
2,228,092	-		BPHYT_RS09805	0.37	-2.4
2,228,157	+		BPHYT_RS09805	0.45	-1.6
2,228,232	+		BPHYT_RS09805	0.55	+0.8
2,228,236	-		BPHYT_RS09805	0.55	-0.4
2,228,237	+		BPHYT_RS09805	0.56	+0.1
2,228,238	-		BPHYT_RS09805	0.56	-0.5
2,228,495	-		BPHYT_RS09805	0.88	-0.3
2,228,548	-				-0.8
2,228,548	-				+0.3
2,228,691	-		BPHYT_RS09810	0.42	-3.2
2,228,762	+		BPHYT_RS09810	0.73	-0.2
2,228,762	+		BPHYT_RS09810	0.73	-0.9
2,228,802	-				-0.7
2,229,984	+		BPHYT_RS09815	0.46	+1.2
2,230,571	-		BPHYT_RS09815	0.73	+1.2
2,230,879	+		BPHYT_RS09815	0.88	-2.5
2,230,881	+		BPHYT_RS09815	0.88	-1.7
2,230,881	+		BPHYT_RS09815	0.88	-1.6
2,231,678	+				-0.4
2,231,701	+				-1.6
2,232,095	+				-0.3
2,232,096	-				+0.6