Strain Fitness in Burkholderia phytofirmans PsJN around BPHYT_RS08565

Experiment: Phenylacetic 5 mM (C)

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Phenylacetic 5 mM (C)
1,957,164	+		BPHYT_RS08560	0.25	+1.1
1,957,227	+		BPHYT_RS08560	0.33	+0.4
1,957,291	-		BPHYT_RS08560	0.41	-0.6
1,957,393	-		BPHYT_RS08560	0.54	+0.8
1,957,393	-		BPHYT_RS08560	0.54	-0.9
1,957,399	-				+1.3
1,957,399	-		BPHYT_RS08560	0.55	-0.8
1,957,801	+				-1.5
1,957,923	+				-2.0
1,958,513	-		BPHYT_RS08565	0.54	-2.9
1,959,027	-				+0.1
1,959,246	+		BPHYT_RS08570	0.15	-1.2
1,959,247	-		BPHYT_RS08570	0.16	-0.2
1,959,292	-		BPHYT_RS08570	0.21	+0.4
1,959,292	-		BPHYT_RS08570	0.21	-0.7
1,959,331	-		BPHYT_RS08570	0.26	-3.4
1,959,331	-		BPHYT_RS08570	0.26	+0.3
1,959,340	-		BPHYT_RS08570	0.27	-1.0
1,959,525	+		BPHYT_RS08570	0.49	-1.6
1,959,525	+		BPHYT_RS08570	0.49	+0.7
1,959,588	+		BPHYT_RS08570	0.57	-0.1
1,959,588	+		BPHYT_RS08570	0.57	+1.0
1,959,597	+		BPHYT_RS08570	0.58	+3.0
1,959,598	-		BPHYT_RS08570	0.58	-0.4
1,959,796	-		BPHYT_RS08570	0.82	-0.2
1,959,861	+				-0.9
1,959,968	-				-1.7