Experiment: Phenylacetic 5 mM (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt BPHYT_RS07060 and BPHYT_RS07065 are separated by 48 nucleotides BPHYT_RS07065 and BPHYT_RS07070 are separated by 162 nucleotides BPHYT_RS07070 and BPHYT_RS07075 are separated by 10 nucleotides BPHYT_RS07075 and BPHYT_RS07080 are separated by 71 nucleotides
BPHYT_RS07060: BPHYT_RS07060 - aldo/keto reductase, at 1,596,947 to 1,597,972
_RS07060
BPHYT_RS07065: BPHYT_RS07065 - 3-ketoacyl-ACP reductase, at 1,598,021 to 1,598,764
_RS07065
BPHYT_RS07070: BPHYT_RS07070 - transcriptional regulator, at 1,598,927 to 1,599,838
_RS07070
BPHYT_RS07075: BPHYT_RS07075 - glyoxalase/bleomycin resistance protein/dioxygenase, at 1,599,849 to 1,600,259
_RS07075
BPHYT_RS07080: BPHYT_RS07080 - glutathione S-transferase, at 1,600,331 to 1,601,341
_RS07080
Position (kb) 1598
1599
1600 Strain fitness (log2 ratio) -2
-1
0
1
2 at 1598.132 kb on + strand, within BPHYT_RS07065 at 1598.132 kb on + strand, within BPHYT_RS07065 at 1598.132 kb on + strand, within BPHYT_RS07065 at 1598.310 kb on + strand, within BPHYT_RS07065 at 1598.336 kb on - strand, within BPHYT_RS07065 at 1598.439 kb on + strand, within BPHYT_RS07065 at 1598.439 kb on + strand, within BPHYT_RS07065 at 1598.653 kb on - strand, within BPHYT_RS07065 at 1598.653 kb on - strand, within BPHYT_RS07065 at 1599.119 kb on + strand, within BPHYT_RS07070 at 1599.120 kb on - strand, within BPHYT_RS07070 at 1599.432 kb on - strand, within BPHYT_RS07070 at 1599.495 kb on - strand, within BPHYT_RS07070 at 1599.556 kb on - strand, within BPHYT_RS07070 at 1599.604 kb on + strand, within BPHYT_RS07070 at 1599.604 kb on + strand, within BPHYT_RS07070 at 1599.650 kb on + strand, within BPHYT_RS07070 at 1599.737 kb on + strand, within BPHYT_RS07070 at 1599.738 kb on - strand, within BPHYT_RS07070 at 1600.027 kb on + strand, within BPHYT_RS07075 at 1600.336 kb on + strand at 1600.459 kb on - strand, within BPHYT_RS07080 at 1600.728 kb on + strand, within BPHYT_RS07080
Per-strain Table
Position Strand Gene LocusTag Fraction Phenylacetic 5 mM (C) remove 1,598,132 + BPHYT_RS07065 0.15 -0.3 1,598,132 + BPHYT_RS07065 0.15 +1.6 1,598,132 + BPHYT_RS07065 0.15 -0.3 1,598,310 + BPHYT_RS07065 0.39 -1.4 1,598,336 - BPHYT_RS07065 0.42 -0.7 1,598,439 + BPHYT_RS07065 0.56 +0.3 1,598,439 + BPHYT_RS07065 0.56 +1.0 1,598,653 - BPHYT_RS07065 0.85 -1.0 1,598,653 - BPHYT_RS07065 0.85 +1.1 1,599,119 + BPHYT_RS07070 0.21 +0.1 1,599,120 - BPHYT_RS07070 0.21 -0.0 1,599,432 - BPHYT_RS07070 0.55 +1.4 1,599,495 - BPHYT_RS07070 0.62 +0.7 1,599,556 - BPHYT_RS07070 0.69 +0.2 1,599,604 + BPHYT_RS07070 0.74 -1.0 1,599,604 + BPHYT_RS07070 0.74 -0.2 1,599,650 + BPHYT_RS07070 0.79 +0.8 1,599,737 + BPHYT_RS07070 0.89 -1.8 1,599,738 - BPHYT_RS07070 0.89 +0.2 1,600,027 + BPHYT_RS07075 0.43 +0.1 1,600,336 + +0.8 1,600,459 - BPHYT_RS07080 0.13 -1.5 1,600,728 + BPHYT_RS07080 0.39 +2.0
Or see this region's nucleotide sequence