Experiment: Phenylacetic 5 mM (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt BPHYT_RS06745 and BPHYT_RS06750 are separated by 21 nucleotides BPHYT_RS06750 and BPHYT_RS06755 are separated by 11 nucleotides BPHYT_RS06755 and BPHYT_RS06760 overlap by 4 nucleotides
BPHYT_RS06745: BPHYT_RS06745 - aminoglycoside phosphotransferase, at 1,526,699 to 1,527,805
_RS06745
BPHYT_RS06750: BPHYT_RS06750 - fructose-2,6-bisphosphatase, at 1,527,827 to 1,528,543
_RS06750
BPHYT_RS06755: BPHYT_RS06755 - enoyl-CoA hydratase, at 1,528,555 to 1,529,343
_RS06755
BPHYT_RS06760: BPHYT_RS06760 - 3-hydroxyacyl-CoA dehydrogenase, at 1,529,340 to 1,530,905
_RS06760
Position (kb) 1528
1529
1530 Strain fitness (log2 ratio) -3
-2
-1
0
1 at 1527.832 kb on + strand at 1527.832 kb on + strand at 1527.840 kb on + strand at 1527.858 kb on + strand at 1527.858 kb on + strand at 1527.859 kb on - strand at 1527.859 kb on - strand at 1527.915 kb on + strand, within BPHYT_RS06750 at 1527.915 kb on + strand, within BPHYT_RS06750 at 1527.915 kb on + strand, within BPHYT_RS06750 at 1527.916 kb on - strand, within BPHYT_RS06750 at 1527.916 kb on - strand, within BPHYT_RS06750 at 1527.916 kb on - strand, within BPHYT_RS06750 at 1528.234 kb on + strand, within BPHYT_RS06750 at 1528.479 kb on + strand at 1528.479 kb on + strand at 1528.483 kb on + strand at 1528.483 kb on + strand at 1528.533 kb on + strand at 1528.534 kb on - strand at 1529.240 kb on + strand, within BPHYT_RS06755 at 1530.136 kb on + strand, within BPHYT_RS06760 at 1530.136 kb on + strand, within BPHYT_RS06760 at 1530.149 kb on - strand, within BPHYT_RS06760 at 1530.299 kb on + strand, within BPHYT_RS06760 at 1530.300 kb on - strand, within BPHYT_RS06760 at 1530.300 kb on - strand, within BPHYT_RS06760 at 1530.341 kb on + strand, within BPHYT_RS06760
Per-strain Table
Position Strand Gene LocusTag Fraction Phenylacetic 5 mM (C) remove 1,527,832 + +0.2 1,527,832 + +0.6 1,527,840 + +0.6 1,527,858 + -0.3 1,527,858 + -1.6 1,527,859 - -0.1 1,527,859 - +1.2 1,527,915 + BPHYT_RS06750 0.12 +1.1 1,527,915 + BPHYT_RS06750 0.12 +0.7 1,527,915 + BPHYT_RS06750 0.12 -0.4 1,527,916 - BPHYT_RS06750 0.12 -0.3 1,527,916 - BPHYT_RS06750 0.12 -2.1 1,527,916 - BPHYT_RS06750 0.12 +0.3 1,528,234 + BPHYT_RS06750 0.57 -1.1 1,528,479 + +1.4 1,528,479 + -0.7 1,528,483 + -0.9 1,528,483 + +1.2 1,528,533 + -0.4 1,528,534 - -1.0 1,529,240 + BPHYT_RS06755 0.87 -3.0 1,530,136 + BPHYT_RS06760 0.51 -1.2 1,530,136 + BPHYT_RS06760 0.51 -3.7 1,530,149 - BPHYT_RS06760 0.52 -0.7 1,530,299 + BPHYT_RS06760 0.61 -1.0 1,530,300 - BPHYT_RS06760 0.61 -2.5 1,530,300 - BPHYT_RS06760 0.61 -1.7 1,530,341 + BPHYT_RS06760 0.64 +0.4
Or see this region's nucleotide sequence