Strain Fitness in Burkholderia phytofirmans PsJN around BPHYT_RS06455

Experiment: Phenylacetic 5 mM (C)

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Phenylacetic 5 mM (C)
1,467,093	+		BPHYT_RS06450	0.59	+1.1
1,467,130	+		BPHYT_RS06450	0.61	+0.7
1,467,131	-		BPHYT_RS06450	0.61	-0.2
1,467,131	-		BPHYT_RS06450	0.61	+0.2
1,467,131	-		BPHYT_RS06450	0.61	+1.7
1,467,131	-		BPHYT_RS06450	0.61	-1.7
1,467,690	+		BPHYT_RS06450	0.88	-2.8
1,467,691	-		BPHYT_RS06450	0.88	+1.6
1,467,943	-				-0.8
1,468,172	+		BPHYT_RS06455	0.33	-0.7
1,468,211	+		BPHYT_RS06455	0.40	-0.2
1,468,397	+		BPHYT_RS06455	0.72	-1.9
1,468,641	-				-0.2
1,468,845	-				-4.1
1,469,114	+		BPHYT_RS06460	0.14	+1.2
1,469,114	+		BPHYT_RS06460	0.14	+0.8
1,469,115	-		BPHYT_RS06460	0.14	+0.3
1,469,144	+		BPHYT_RS06460	0.15	+0.5
1,469,318	+		BPHYT_RS06460	0.21	+1.0
1,469,319	-		BPHYT_RS06460	0.21	+0.7
1,469,319	-		BPHYT_RS06460	0.21	-0.3
1,469,319	-		BPHYT_RS06460	0.21	+3.0