Experiment: Phenylacetic 5 mM (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt BPHYT_RS06430 and BPHYT_RS06435 are separated by 258 nucleotides BPHYT_RS06435 and BPHYT_RS06440 overlap by 1 nucleotides BPHYT_RS06440 and BPHYT_RS06445 overlap by 4 nucleotides BPHYT_RS06445 and BPHYT_RS06450 are separated by 81 nucleotides
BPHYT_RS06430: BPHYT_RS06430 - quinone oxidoreductase, at 1,462,541 to 1,463,515
_RS06430
BPHYT_RS06435: BPHYT_RS06435 - hypothetical protein, at 1,463,774 to 1,463,884
_RS06435
BPHYT_RS06440: BPHYT_RS06440 - ATPase, at 1,463,884 to 1,463,976
_RS06440
BPHYT_RS06445: BPHYT_RS06445 - ATPase, at 1,463,973 to 1,465,778
_RS06445
BPHYT_RS06450: BPHYT_RS06450 - potassium-transporting ATPase subunit B, at 1,465,860 to 1,467,944
_RS06450
Position (kb) 1463
1464
1465
1466 Strain fitness (log2 ratio) -4
-3
-2
-1
0
1
2 at 1463.111 kb on + strand, within BPHYT_RS06430 at 1463.178 kb on - strand, within BPHYT_RS06430 at 1463.178 kb on - strand, within BPHYT_RS06430 at 1463.343 kb on - strand, within BPHYT_RS06430 at 1463.590 kb on + strand at 1463.686 kb on + strand at 1463.732 kb on + strand at 1463.787 kb on - strand, within BPHYT_RS06435 at 1463.787 kb on - strand, within BPHYT_RS06435 at 1463.944 kb on + strand, within BPHYT_RS06440 at 1463.945 kb on - strand, within BPHYT_RS06440 at 1464.166 kb on - strand, within BPHYT_RS06445 at 1464.213 kb on + strand, within BPHYT_RS06445 at 1464.333 kb on + strand, within BPHYT_RS06445 at 1464.333 kb on + strand, within BPHYT_RS06445 at 1464.507 kb on + strand, within BPHYT_RS06445 at 1464.508 kb on - strand, within BPHYT_RS06445 at 1464.583 kb on - strand, within BPHYT_RS06445 at 1464.616 kb on - strand, within BPHYT_RS06445 at 1465.230 kb on + strand, within BPHYT_RS06445 at 1465.231 kb on - strand, within BPHYT_RS06445 at 1465.531 kb on - strand, within BPHYT_RS06445 at 1465.716 kb on + strand at 1465.716 kb on + strand at 1465.871 kb on + strand at 1465.872 kb on - strand at 1465.983 kb on + strand at 1465.983 kb on + strand at 1466.302 kb on + strand, within BPHYT_RS06450 at 1466.718 kb on - strand, within BPHYT_RS06450
Per-strain Table
Position Strand Gene LocusTag Fraction Phenylacetic 5 mM (C) remove 1,463,111 + BPHYT_RS06430 0.58 -4.3 1,463,178 - BPHYT_RS06430 0.65 +0.6 1,463,178 - BPHYT_RS06430 0.65 -0.9 1,463,343 - BPHYT_RS06430 0.82 -0.8 1,463,590 + +1.4 1,463,686 + +1.4 1,463,732 + +1.1 1,463,787 - BPHYT_RS06435 0.12 -1.2 1,463,787 - BPHYT_RS06435 0.12 +0.3 1,463,944 + BPHYT_RS06440 0.65 -0.0 1,463,945 - BPHYT_RS06440 0.66 -0.0 1,464,166 - BPHYT_RS06445 0.11 -1.9 1,464,213 + BPHYT_RS06445 0.13 -0.6 1,464,333 + BPHYT_RS06445 0.20 -0.5 1,464,333 + BPHYT_RS06445 0.20 +0.0 1,464,507 + BPHYT_RS06445 0.30 -0.3 1,464,508 - BPHYT_RS06445 0.30 -1.1 1,464,583 - BPHYT_RS06445 0.34 +0.5 1,464,616 - BPHYT_RS06445 0.36 +1.9 1,465,230 + BPHYT_RS06445 0.70 -2.0 1,465,231 - BPHYT_RS06445 0.70 -0.7 1,465,531 - BPHYT_RS06445 0.86 -0.4 1,465,716 + -0.4 1,465,716 + +0.4 1,465,871 + -0.1 1,465,872 - -0.2 1,465,983 + +1.2 1,465,983 + +0.1 1,466,302 + BPHYT_RS06450 0.21 -0.4 1,466,718 - BPHYT_RS06450 0.41 +0.5
Or see this region's nucleotide sequence