Strain Fitness in Burkholderia phytofirmans PsJN around BPHYT_RS03955
Experiment: Phenylacetic 5 mM (C)
Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.
Per-strain Table
Position | Strand | Gene | LocusTag | Fraction | Phenylacetic 5 mM (C) |
---|---|---|---|---|---|
remove | |||||
895,296 | - | +0.7 | |||
895,454 | - | -0.9 | |||
895,630 | + | +0.2 | |||
896,442 | - | BPHYT_RS03955 | 0.27 | +1.2 | |
896,732 | + | BPHYT_RS03955 | 0.53 | -0.6 | |
896,734 | + | BPHYT_RS03955 | 0.53 | -0.2 | |
896,841 | - | BPHYT_RS03955 | 0.63 | +1.0 | |
897,420 | + | +0.3 | |||
897,637 | + | BPHYT_RS03960 | 0.15 | -1.7 | |
897,637 | + | BPHYT_RS03960 | 0.15 | -0.9 | |
897,638 | - | BPHYT_RS03960 | 0.15 | +2.1 | |
897,923 | + | BPHYT_RS03960 | 0.27 | +0.7 | |
897,923 | + | BPHYT_RS03960 | 0.27 | +0.5 | |
897,924 | - | BPHYT_RS03960 | 0.27 | -0.0 | |
898,002 | + | BPHYT_RS03960 | 0.30 | -0.0 |
Or see this region's nucleotide sequence