Experiment: Phenylacetic 5 mM (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt BPHYT_RS02160 and BPHYT_RS02165 overlap by 1 nucleotides BPHYT_RS02165 and BPHYT_RS02170 are separated by 589 nucleotides
BPHYT_RS02160: BPHYT_RS02160 - 8-amino-7-oxononanoate synthase, at 494,134 to 495,318
_RS02160
BPHYT_RS02165: BPHYT_RS02165 - adenosylmethionine-8-amino-7-oxononanoate aminotransferase, at 495,318 to 496,679
_RS02165
BPHYT_RS02170: BPHYT_RS02170 - type VI secretion protein, at 497,269 to 499,155
_RS02170
Position (kb) 495
496
497 Strain fitness (log2 ratio) -3
-2
-1
0
1
2 at 494.516 kb on + strand, within BPHYT_RS02160 at 494.859 kb on - strand, within BPHYT_RS02160 at 494.859 kb on - strand, within BPHYT_RS02160 at 494.982 kb on - strand, within BPHYT_RS02160 at 495.174 kb on - strand, within BPHYT_RS02160 at 495.400 kb on + strand at 495.401 kb on - strand at 495.697 kb on + strand, within BPHYT_RS02165 at 495.949 kb on + strand, within BPHYT_RS02165 at 495.949 kb on + strand, within BPHYT_RS02165 at 495.949 kb on + strand, within BPHYT_RS02165 at 495.950 kb on - strand, within BPHYT_RS02165 at 496.154 kb on - strand, within BPHYT_RS02165 at 496.214 kb on - strand, within BPHYT_RS02165 at 496.728 kb on + strand at 496.814 kb on + strand at 496.945 kb on - strand at 497.025 kb on - strand at 497.293 kb on + strand at 497.294 kb on - strand at 497.311 kb on + strand at 497.311 kb on + strand at 497.312 kb on - strand at 497.401 kb on + strand at 497.401 kb on + strand at 497.402 kb on - strand at 497.506 kb on + strand, within BPHYT_RS02170 at 497.515 kb on + strand, within BPHYT_RS02170 at 497.537 kb on + strand, within BPHYT_RS02170 at 497.571 kb on + strand, within BPHYT_RS02170 at 497.571 kb on + strand, within BPHYT_RS02170 at 497.571 kb on + strand, within BPHYT_RS02170 at 497.571 kb on + strand, within BPHYT_RS02170 at 497.572 kb on - strand, within BPHYT_RS02170 at 497.572 kb on - strand, within BPHYT_RS02170 at 497.572 kb on - strand, within BPHYT_RS02170 at 497.572 kb on - strand, within BPHYT_RS02170 at 497.572 kb on - strand, within BPHYT_RS02170 at 497.572 kb on - strand, within BPHYT_RS02170
Per-strain Table
Position Strand Gene LocusTag Fraction Phenylacetic 5 mM (C) remove 494,516 + BPHYT_RS02160 0.32 -2.5 494,859 - BPHYT_RS02160 0.61 +0.7 494,859 - BPHYT_RS02160 0.61 -0.7 494,982 - BPHYT_RS02160 0.72 +0.9 495,174 - BPHYT_RS02160 0.88 -3.4 495,400 + +0.2 495,401 - +0.2 495,697 + BPHYT_RS02165 0.28 -0.0 495,949 + BPHYT_RS02165 0.46 -0.1 495,949 + BPHYT_RS02165 0.46 -0.5 495,949 + BPHYT_RS02165 0.46 -0.5 495,950 - BPHYT_RS02165 0.46 -1.0 496,154 - BPHYT_RS02165 0.61 -1.5 496,214 - BPHYT_RS02165 0.66 -0.9 496,728 + +0.5 496,814 + -0.1 496,945 - +0.9 497,025 - +1.1 497,293 + -3.2 497,294 - +2.2 497,311 + -0.1 497,311 + +0.4 497,312 - +0.2 497,401 + -1.2 497,401 + -0.0 497,402 - -0.7 497,506 + BPHYT_RS02170 0.13 -2.1 497,515 + BPHYT_RS02170 0.13 +0.8 497,537 + BPHYT_RS02170 0.14 +0.2 497,571 + BPHYT_RS02170 0.16 -0.1 497,571 + BPHYT_RS02170 0.16 +0.5 497,571 + BPHYT_RS02170 0.16 -1.3 497,571 + BPHYT_RS02170 0.16 -1.0 497,572 - BPHYT_RS02170 0.16 -0.9 497,572 - BPHYT_RS02170 0.16 -2.5 497,572 - BPHYT_RS02170 0.16 +0.5 497,572 - BPHYT_RS02170 0.16 -0.2 497,572 - BPHYT_RS02170 0.16 -1.1 497,572 - BPHYT_RS02170 0.16 -1.4
Or see this region's nucleotide sequence