Experiment: Phenylacetic 5 mM (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt BPHYT_RS00490 and BPHYT_RS00495 are separated by 18 nucleotides BPHYT_RS00495 and BPHYT_RS00500 are separated by 68 nucleotides
BPHYT_RS00490: BPHYT_RS00490 - NADH dehydrogenase, at 119,410 to 120,729
_RS00490
BPHYT_RS00495: BPHYT_RS00495 - S-formylglutathione hydrolase, at 120,748 to 121,578
_RS00495
BPHYT_RS00500: BPHYT_RS00500 - hypothetical protein, at 121,647 to 122,987
_RS00500
Position (kb) 120
121
122 Strain fitness (log2 ratio) -5
-4
-3
-2
-1
0
1
2
3
4
5 at 119.899 kb on - strand, within BPHYT_RS00490 at 119.982 kb on - strand, within BPHYT_RS00490 at 119.983 kb on + strand, within BPHYT_RS00490 at 119.984 kb on - strand, within BPHYT_RS00490 at 120.025 kb on + strand, within BPHYT_RS00490 at 120.063 kb on + strand, within BPHYT_RS00490 at 120.064 kb on - strand, within BPHYT_RS00490 at 120.064 kb on - strand, within BPHYT_RS00490 at 120.064 kb on - strand, within BPHYT_RS00490 at 120.065 kb on + strand, within BPHYT_RS00490 at 120.383 kb on + strand, within BPHYT_RS00490 at 120.384 kb on - strand, within BPHYT_RS00490 at 120.423 kb on - strand, within BPHYT_RS00490 at 120.451 kb on - strand, within BPHYT_RS00490 at 120.527 kb on + strand, within BPHYT_RS00490 at 120.527 kb on + strand, within BPHYT_RS00490 at 120.581 kb on + strand, within BPHYT_RS00490 at 120.582 kb on - strand, within BPHYT_RS00490 at 120.582 kb on - strand, within BPHYT_RS00490 at 120.725 kb on - strand at 120.725 kb on - strand at 120.725 kb on - strand at 120.781 kb on - strand at 120.809 kb on + strand at 120.809 kb on + strand at 120.809 kb on + strand at 120.810 kb on - strand at 120.812 kb on + strand at 120.812 kb on + strand at 120.813 kb on - strand at 120.813 kb on - strand at 120.813 kb on - strand at 120.987 kb on - strand, within BPHYT_RS00495 at 121.192 kb on + strand, within BPHYT_RS00495 at 121.192 kb on + strand, within BPHYT_RS00495 at 121.220 kb on + strand, within BPHYT_RS00495 at 121.221 kb on - strand, within BPHYT_RS00495 at 121.221 kb on - strand, within BPHYT_RS00495 at 121.226 kb on + strand, within BPHYT_RS00495 at 121.226 kb on + strand, within BPHYT_RS00495 at 121.226 kb on + strand, within BPHYT_RS00495 at 121.226 kb on + strand, within BPHYT_RS00495 at 121.226 kb on + strand, within BPHYT_RS00495 at 121.226 kb on + strand, within BPHYT_RS00495 at 121.227 kb on - strand, within BPHYT_RS00495 at 121.227 kb on - strand, within BPHYT_RS00495 at 121.271 kb on + strand, within BPHYT_RS00495 at 121.298 kb on + strand, within BPHYT_RS00495 at 121.416 kb on + strand, within BPHYT_RS00495 at 121.439 kb on + strand, within BPHYT_RS00495 at 121.529 kb on + strand at 121.529 kb on + strand at 121.589 kb on + strand at 121.822 kb on + strand, within BPHYT_RS00500 at 121.825 kb on + strand, within BPHYT_RS00500 at 121.826 kb on - strand, within BPHYT_RS00500 at 122.125 kb on + strand, within BPHYT_RS00500 at 122.126 kb on - strand, within BPHYT_RS00500 at 122.126 kb on - strand at 122.246 kb on + strand, within BPHYT_RS00500 at 122.247 kb on - strand, within BPHYT_RS00500 at 122.247 kb on - strand, within BPHYT_RS00500 at 122.247 kb on - strand, within BPHYT_RS00500 at 122.247 kb on - strand, within BPHYT_RS00500 at 122.423 kb on + strand, within BPHYT_RS00500
Per-strain Table
Position Strand Gene LocusTag Fraction Phenylacetic 5 mM (C) remove 119,899 - BPHYT_RS00490 0.37 +3.8 119,982 - BPHYT_RS00490 0.43 -1.5 119,983 + BPHYT_RS00490 0.43 +0.3 119,984 - BPHYT_RS00490 0.43 -1.0 120,025 + BPHYT_RS00490 0.47 -0.2 120,063 + BPHYT_RS00490 0.49 +0.6 120,064 - BPHYT_RS00490 0.50 -2.3 120,064 - BPHYT_RS00490 0.50 -1.2 120,064 - BPHYT_RS00490 0.50 -0.9 120,065 + BPHYT_RS00490 0.50 +0.2 120,383 + BPHYT_RS00490 0.74 +0.7 120,384 - BPHYT_RS00490 0.74 -2.6 120,423 - BPHYT_RS00490 0.77 +0.3 120,451 - BPHYT_RS00490 0.79 -0.7 120,527 + BPHYT_RS00490 0.85 -0.7 120,527 + BPHYT_RS00490 0.85 +0.3 120,581 + BPHYT_RS00490 0.89 -0.5 120,582 - BPHYT_RS00490 0.89 +0.6 120,582 - BPHYT_RS00490 0.89 -0.7 120,725 - -0.9 120,725 - +0.6 120,725 - -3.7 120,781 - +2.1 120,809 + -0.5 120,809 + -0.2 120,809 + +0.0 120,810 - -5.1 120,812 + +0.3 120,812 + -0.5 120,813 - +0.5 120,813 - -2.1 120,813 - +0.0 120,987 - BPHYT_RS00495 0.29 -0.4 121,192 + BPHYT_RS00495 0.53 +0.9 121,192 + BPHYT_RS00495 0.53 +0.8 121,220 + BPHYT_RS00495 0.57 -0.8 121,221 - BPHYT_RS00495 0.57 -0.1 121,221 - BPHYT_RS00495 0.57 +1.0 121,226 + BPHYT_RS00495 0.58 +0.6 121,226 + BPHYT_RS00495 0.58 -0.7 121,226 + BPHYT_RS00495 0.58 -0.4 121,226 + BPHYT_RS00495 0.58 -1.1 121,226 + BPHYT_RS00495 0.58 +0.1 121,226 + BPHYT_RS00495 0.58 -2.5 121,227 - BPHYT_RS00495 0.58 -2.6 121,227 - BPHYT_RS00495 0.58 -1.5 121,271 + BPHYT_RS00495 0.63 +0.4 121,298 + BPHYT_RS00495 0.66 +0.1 121,416 + BPHYT_RS00495 0.80 +0.1 121,439 + BPHYT_RS00495 0.83 -0.6 121,529 + -2.0 121,529 + -1.5 121,589 + -0.6 121,822 + BPHYT_RS00500 0.13 +0.7 121,825 + BPHYT_RS00500 0.13 +0.2 121,826 - BPHYT_RS00500 0.13 -0.2 122,125 + BPHYT_RS00500 0.36 -0.5 122,126 - BPHYT_RS00500 0.36 +0.2 122,126 - -0.2 122,246 + BPHYT_RS00500 0.45 +1.4 122,247 - BPHYT_RS00500 0.45 +5.3 122,247 - BPHYT_RS00500 0.45 -0.0 122,247 - BPHYT_RS00500 0.45 -0.5 122,247 - BPHYT_RS00500 0.45 +0.3 122,423 + BPHYT_RS00500 0.58 +1.0
Or see this region's nucleotide sequence