Strain Fitness in Burkholderia phytofirmans PsJN around BPHYT_RS00480

Experiment: Phenylacetic 5 mM (C)

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Phenylacetic 5 mM (C)
115,150	+				-0.5
115,294	+				-0.5
115,294	+				+0.0
115,294	+				-4.1
115,294	+				-0.2
115,524	+				+1.2
115,613	+		BPHYT_RS00480	0.10	+0.4
115,613	+		BPHYT_RS00480	0.10	+1.8
115,716	-		BPHYT_RS00480	0.14	-0.6
115,745	-		BPHYT_RS00480	0.15	+0.3
115,863	-		BPHYT_RS00480	0.20	-1.7
115,863	-		BPHYT_RS00480	0.20	+1.5
116,063	+		BPHYT_RS00480	0.27	-3.6
116,063	+		BPHYT_RS00480	0.27	+1.8
116,063	+		BPHYT_RS00480	0.27	+0.4
116,064	-		BPHYT_RS00480	0.27	-2.6
116,064	-		BPHYT_RS00480	0.27	-0.5
116,625	-		BPHYT_RS00480	0.48	+3.0
116,625	-		BPHYT_RS00480	0.48	+0.4
116,674	+		BPHYT_RS00480	0.50	-0.4
116,675	-		BPHYT_RS00480	0.50	-1.3
116,675	-		BPHYT_RS00480	0.50	-0.6
116,678	+		BPHYT_RS00480	0.50	-1.7
116,678	+		BPHYT_RS00480	0.50	-2.5
116,679	-		BPHYT_RS00480	0.50	-0.4
117,230	+		BPHYT_RS00480	0.71	-1.9
117,290	+		BPHYT_RS00480	0.74	-1.9
117,291	-		BPHYT_RS00480	0.74	-1.8
117,378	-		BPHYT_RS00480	0.77	-3.6
117,500	+		BPHYT_RS00480	0.81	-3.3
117,501	-		BPHYT_RS00480	0.82	-0.8
117,501	-		BPHYT_RS00480	0.82	-0.5
117,501	-		BPHYT_RS00480	0.82	-0.6
117,569	+		BPHYT_RS00480	0.84	-0.8
117,611	+		BPHYT_RS00480	0.86	-0.4
117,611	+		BPHYT_RS00480	0.86	+0.5
117,611	+		BPHYT_RS00480	0.86	+0.8
117,611	+		BPHYT_RS00480	0.86	+0.4
117,611	+		BPHYT_RS00480	0.86	+2.2
117,612	-		BPHYT_RS00480	0.86	-0.1
117,612	-		BPHYT_RS00480	0.86	-0.2
117,612	-		BPHYT_RS00480	0.86	+2.1
117,612	-		BPHYT_RS00480	0.86	-1.3
118,003	+				-0.7
118,178	+				-1.6
118,343	+		BPHYT_RS00485	0.22	+0.1
118,343	+		BPHYT_RS00485	0.22	+0.2
118,344	-		BPHYT_RS00485	0.23	-0.1
118,377	-		BPHYT_RS00485	0.25	-0.8
118,430	+		BPHYT_RS00485	0.29	+0.2
118,431	-		BPHYT_RS00485	0.29	-0.9
118,565	+		BPHYT_RS00485	0.39	-1.1
118,626	-		BPHYT_RS00485	0.44	-1.4
118,626	-		BPHYT_RS00485	0.44	-0.0
118,626	-		BPHYT_RS00485	0.44	-0.2
118,887	+		BPHYT_RS00485	0.64	+0.1
118,889	+		BPHYT_RS00485	0.64	-0.8
118,889	+		BPHYT_RS00485	0.64	-1.1
118,890	-		BPHYT_RS00485	0.64	-1.5
118,890	-		BPHYT_RS00485	0.64	+1.3
118,948	-		BPHYT_RS00485	0.68	+1.0