Strain Fitness in Desulfovibrio vulgaris Hildenborough JW710 around DVU3200

Experiment: Formate/Acetate-Sulfite (60/5-20 mM)

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Formate/Acetate-Sulfite (60/5-20 mM)
3,362,446	+				+0.5
3,362,482	+				-0.2
3,362,525	-		DVU3199	0.13	-0.3
3,362,525	-		DVU3199	0.13	-0.3
3,362,525	-		DVU3199	0.13	-1.1
3,362,536	+		DVU3199	0.17	-0.1
3,362,561	+		DVU3199	0.25	-0.2
3,362,604	-		DVU3199	0.39	-0.2
3,362,831	-				-0.8
3,362,875	+	recR	DVU3200	0.12	-0.3
3,362,947	+	recR	DVU3200	0.23	-1.7
3,362,955	-	recR	DVU3200	0.25	-0.4
3,362,965	+	recR	DVU3200	0.26	+0.2
3,362,973	-	recR	DVU3200	0.28	-0.2
3,362,981	+	recR	DVU3200	0.29	-0.4
3,363,107	-	recR	DVU3200	0.50	+2.3
3,363,111	+	recR	DVU3200	0.50	-1.1
3,363,228	-	recR	DVU3200	0.70	-0.4
3,363,236	+	recR	DVU3200	0.71	-0.2
3,363,329	+	recR	DVU3200	0.86	+0.6
3,363,355	+				-0.2
3,363,365	+				-0.4
3,363,390	-				-0.2
3,363,395	-				-0.6
3,363,424	+				-1.2
3,363,437	-				-0.2
3,363,747	-				+0.2
3,363,882	+				+0.0
3,363,883	+				+0.3
3,363,883	+				+0.0
3,363,931	+		DVU3201	0.11	-0.1
3,363,931	+		DVU3201	0.11	-0.2
3,364,038	-		DVU3201	0.21	-0.3
3,364,091	+		DVU3201	0.26	-0.3
3,364,242	+		DVU3201	0.40	+0.2
3,364,242	+		DVU3201	0.40	-0.1
3,364,242	+		DVU3201	0.40	-0.3
3,364,242	+		DVU3201	0.40	+3.4
3,364,243	-		DVU3201	0.40	+1.1
3,364,250	-		DVU3201	0.41	-0.0
3,364,250	-		DVU3201	0.41	+0.7
3,364,346	+		DVU3201	0.50	-0.4
3,364,383	-		DVU3201	0.54	+0.3