Strain Fitness in Desulfovibrio vulgaris Hildenborough JW710 around DVU3025
Experiment: Formate/Acetate-Sulfite (60/5-20 mM)
Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.
Per-strain Table
Position | Strand | Gene | LocusTag | Fraction | Formate/Acetate-Sulfite (60/5-20 mM) |
---|---|---|---|---|---|
remove | |||||
3,143,183 | + | atoC | DVU3023 | 0.88 | +0.6 |
3,143,351 | + | +0.1 | |||
3,143,500 | + | +0.4 | |||
3,143,508 | - | +1.0 | |||
3,143,664 | + | DVU3024 | 0.29 | -1.8 | |
3,143,664 | + | DVU3024 | 0.29 | -1.1 | |
3,143,740 | + | DVU3024 | 0.74 | -2.9 | |
3,147,460 | - | -0.1 | |||
3,147,499 | + | -0.3 | |||
3,147,514 | + | +0.9 | |||
3,147,621 | + | +0.8 | |||
3,148,000 | + | DVU3026 | 0.28 | -0.3 | |
3,148,272 | + | DVU3026 | 0.44 | -0.6 | |
3,148,306 | + | DVU3026 | 0.46 | +1.2 | |
3,148,387 | - | DVU3026 | 0.51 | +0.9 |
Or see this region's nucleotide sequence