Strain Fitness in Desulfovibrio vulgaris Hildenborough JW710 around DVU3231

Experiment: Formate/Acetate-Sulfite (60/5-20 mM)

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Formate/Acetate-Sulfite (60/5-20 mM)
3,397,401	+	fliA	DVU3229	0.73	+0.8
3,397,417	-	fliA	DVU3229	0.75	+0.4
3,397,417	-	fliA	DVU3229	0.75	+0.4
3,397,436	-	fliA	DVU3229	0.77	+0.0
3,397,453	-	fliA	DVU3229	0.79	+0.8
3,397,459	-	fliA	DVU3229	0.80	+0.2
3,397,472	-	fliA	DVU3229	0.82	-0.2
3,397,513	-	fliA	DVU3229	0.87	+0.3
3,397,610	-				-1.5
3,397,669	+		DVU3230	0.12	-1.0
3,398,159	-		DVU3230	0.71	-0.7
3,398,363	+				-1.8
3,398,477	-				+0.3
3,398,540	+		DVU3231	0.13	+0.3
3,398,563	-		DVU3231	0.15	+1.0
3,398,570	-		DVU3231	0.16	+1.2
3,398,627	+		DVU3231	0.21	+0.1
3,398,660	+		DVU3231	0.24	-0.1
3,398,724	-		DVU3231	0.30	+1.0
3,398,764	-		DVU3231	0.33	+0.6
3,398,766	+		DVU3231	0.34	+0.0
3,398,774	-		DVU3231	0.34	-1.2
3,398,794	+		DVU3231	0.36	+0.1
3,398,794	+		DVU3231	0.36	+0.4
3,398,814	-		DVU3231	0.38	+0.8
3,398,853	+		DVU3231	0.41	+0.3
3,398,885	+		DVU3231	0.44	+0.5
3,398,903	+		DVU3231	0.46	+0.5
3,398,916	+		DVU3231	0.47	+0.5
3,398,958	-		DVU3231	0.51	+0.5
3,398,963	-		DVU3231	0.51	+1.2
3,399,053	-		DVU3231	0.60	+0.5
3,399,107	+		DVU3231	0.65	+0.3
3,399,112	+		DVU3231	0.65	+0.6
3,399,127	-		DVU3231	0.66	-0.0
3,399,127	-		DVU3231	0.66	+1.0
3,399,136	+		DVU3231	0.67	+0.4
3,399,168	-		DVU3231	0.70	+0.2
3,399,183	+		DVU3231	0.71	+0.4
3,399,185	-		DVU3231	0.72	+0.6
3,399,192	+		DVU3231	0.72	+0.3
3,399,239	+		DVU3231	0.77	+0.1
3,399,239	+		DVU3231	0.77	+0.5
3,399,272	-		DVU3231	0.80	+0.3
3,399,320	-		DVU3231	0.84	-0.8
3,399,342	-		DVU3231	0.86	+0.4
3,399,443	+				-0.0
3,399,448	+				+1.1
3,399,452	+				-1.3
3,399,460	-				+1.0
3,399,470	-				+0.7
3,399,482	+				+0.1
3,399,484	-				+0.5
3,399,621	-				+0.5
3,399,694	-				+0.7
3,399,761	-	flhA	DVU3232	0.13	+0.5
3,399,763	-	flhA	DVU3232	0.13	-0.4
3,399,763	-	flhA	DVU3232	0.13	+0.2
3,399,821	-	flhA	DVU3232	0.15	+0.5
3,399,919	+	flhA	DVU3232	0.20	+0.6
3,399,960	+	flhA	DVU3232	0.22	+0.6
3,399,985	-	flhA	DVU3232	0.23	+0.8
3,399,997	-	flhA	DVU3232	0.24	+0.7
3,399,997	-	flhA	DVU3232	0.24	-0.0
3,400,064	+	flhA	DVU3232	0.27	-0.2
3,400,140	+	flhA	DVU3232	0.31	+0.4
3,400,146	-	flhA	DVU3232	0.31	+0.4
3,400,148	-	flhA	DVU3232	0.31	+0.2
3,400,204	+	flhA	DVU3232	0.34	+0.9
3,400,274	-	flhA	DVU3232	0.37	+0.5
3,400,331	+	flhA	DVU3232	0.40	+0.4
3,400,331	-	flhA	DVU3232	0.40	-0.3
3,400,343	-	flhA	DVU3232	0.40	-1.1
3,400,378	-	flhA	DVU3232	0.42	+0.3
3,400,381	+	flhA	DVU3232	0.42	+0.4
3,400,393	+	flhA	DVU3232	0.43	+0.4
3,400,393	+	flhA	DVU3232	0.43	-0.9
3,400,401	-	flhA	DVU3232	0.43	-0.3
3,400,431	-	flhA	DVU3232	0.44	+0.1
3,400,467	-	flhA	DVU3232	0.46	+0.5