Experiment: L-Proline (N)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt HP15_3333 and HP15_3334 are separated by 21 nucleotides HP15_3334 and HP15_3335 are separated by 49 nucleotides
HP15_3333: HP15_3333 - membrane protein YdgA-like protein, at 3,493,495 to 3,494,784
_3333
HP15_3334: HP15_3334 - polyphosphate kinase, at 3,494,806 to 3,496,947
_3334
HP15_3335: HP15_3335 - delta-aminolevulinic acid dehydratase, at 3,496,997 to 3,498,016
_3335
Position (kb)
3494
3495
3496
3497 Strain fitness (log2 ratio)
-2
-1
0
1 at 3493.873 kb on - strand, within HP15_3333 at 3493.893 kb on + strand, within HP15_3333 at 3493.959 kb on - strand, within HP15_3333 at 3494.003 kb on + strand, within HP15_3333 at 3494.003 kb on + strand, within HP15_3333 at 3494.003 kb on + strand, within HP15_3333 at 3494.038 kb on + strand, within HP15_3333 at 3494.064 kb on - strand, within HP15_3333 at 3494.082 kb on + strand, within HP15_3333 at 3494.177 kb on - strand, within HP15_3333 at 3494.180 kb on + strand, within HP15_3333 at 3494.188 kb on - strand, within HP15_3333 at 3494.228 kb on + strand, within HP15_3333 at 3494.257 kb on + strand, within HP15_3333 at 3494.262 kb on + strand, within HP15_3333 at 3494.262 kb on + strand, within HP15_3333 at 3494.262 kb on + strand, within HP15_3333 at 3494.270 kb on - strand, within HP15_3333 at 3494.270 kb on - strand, within HP15_3333 at 3494.270 kb on - strand, within HP15_3333 at 3494.542 kb on - strand, within HP15_3333 at 3494.542 kb on - strand, within HP15_3333 at 3494.555 kb on - strand, within HP15_3333 at 3494.656 kb on + strand at 3494.674 kb on - strand at 3494.720 kb on + strand at 3494.720 kb on + strand at 3494.720 kb on + strand at 3494.728 kb on - strand at 3494.728 kb on - strand at 3494.728 kb on - strand at 3494.865 kb on - strand at 3494.894 kb on - strand at 3494.904 kb on + strand at 3494.959 kb on - strand at 3495.202 kb on + strand, within HP15_3334 at 3495.232 kb on - strand, within HP15_3334 at 3495.331 kb on + strand, within HP15_3334 at 3495.368 kb on + strand, within HP15_3334 at 3495.368 kb on + strand, within HP15_3334 at 3495.460 kb on - strand, within HP15_3334 at 3495.594 kb on - strand, within HP15_3334 at 3495.929 kb on - strand, within HP15_3334 at 3495.963 kb on - strand, within HP15_3334 at 3496.016 kb on - strand, within HP15_3334 at 3496.104 kb on - strand, within HP15_3334 at 3496.160 kb on + strand, within HP15_3334 at 3496.177 kb on - strand, within HP15_3334 at 3496.285 kb on - strand, within HP15_3334 at 3496.430 kb on - strand, within HP15_3334 at 3496.444 kb on - strand, within HP15_3334 at 3496.489 kb on - strand, within HP15_3334 at 3496.536 kb on - strand, within HP15_3334 at 3496.576 kb on - strand, within HP15_3334 at 3496.604 kb on + strand, within HP15_3334 at 3496.854 kb on + strand at 3496.973 kb on - strand at 3496.996 kb on - strand at 3497.021 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction L-Proline (N) remove 3,493,873 - HP15_3333 0.29 -0.6 3,493,893 + HP15_3333 0.31 -1.8 3,493,959 - HP15_3333 0.36 +0.1 3,494,003 + HP15_3333 0.39 +0.2 3,494,003 + HP15_3333 0.39 -0.0 3,494,003 + HP15_3333 0.39 -0.2 3,494,038 + HP15_3333 0.42 -0.2 3,494,064 - HP15_3333 0.44 +0.4 3,494,082 + HP15_3333 0.46 +0.9 3,494,177 - HP15_3333 0.53 +0.3 3,494,180 + HP15_3333 0.53 -1.2 3,494,188 - HP15_3333 0.54 +0.6 3,494,228 + HP15_3333 0.57 -0.2 3,494,257 + HP15_3333 0.59 +0.3 3,494,262 + HP15_3333 0.59 +0.8 3,494,262 + HP15_3333 0.59 -0.2 3,494,262 + HP15_3333 0.59 -0.3 3,494,270 - HP15_3333 0.60 +1.0 3,494,270 - HP15_3333 0.60 -0.5 3,494,270 - HP15_3333 0.60 +0.7 3,494,542 - HP15_3333 0.81 -0.1 3,494,542 - HP15_3333 0.81 +0.0 3,494,555 - HP15_3333 0.82 +0.5 3,494,656 + +0.3 3,494,674 - +0.2 3,494,720 + -2.2 3,494,720 + +0.9 3,494,720 + +0.1 3,494,728 - +0.6 3,494,728 - +0.1 3,494,728 - +0.4 3,494,865 - +0.4 3,494,894 - -0.8 3,494,904 + -0.0 3,494,959 - -0.6 3,495,202 + HP15_3334 0.18 -1.4 3,495,232 - HP15_3334 0.20 -0.5 3,495,331 + HP15_3334 0.25 -1.2 3,495,368 + HP15_3334 0.26 +1.4 3,495,368 + HP15_3334 0.26 -0.2 3,495,460 - HP15_3334 0.31 -0.8 3,495,594 - HP15_3334 0.37 -0.5 3,495,929 - HP15_3334 0.52 -0.8 3,495,963 - HP15_3334 0.54 +0.5 3,496,016 - HP15_3334 0.56 -0.7 3,496,104 - HP15_3334 0.61 -1.1 3,496,160 + HP15_3334 0.63 +0.5 3,496,177 - HP15_3334 0.64 -1.2 3,496,285 - HP15_3334 0.69 -0.6 3,496,430 - HP15_3334 0.76 -0.2 3,496,444 - HP15_3334 0.76 -1.0 3,496,489 - HP15_3334 0.79 -1.1 3,496,536 - HP15_3334 0.81 -0.7 3,496,576 - HP15_3334 0.83 -1.0 3,496,604 + HP15_3334 0.84 +0.3 3,496,854 + -0.8 3,496,973 - -0.3 3,496,996 - +1.1 3,497,021 - +0.4
Or see this region's nucleotide sequence